RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 ZCCHC4Q9H5U6 513 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 IGLV3-16A0A075B6K0 115 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 ARRB2P32121 409 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 GSK3AP49840 483 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 DIO1P49895 249 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 SYT6Q5T7P8 510 aaPredicted RBP11.6□□□□□ -0.55
NUP58-206ENST00000463407 TMEM81Q6P7N7 255 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 ABI3BPQ7Z7G0 1075 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 CISD2Q8N5K1 135 aaKnown RBP11.6□□□□□ -0.55
NUP58-206ENST00000463407 AKR7LQ8NHP1 331 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 ZNF486Q96H40 463 aaPredicted RBP11.6□□□□□ -0.55
NUP58-206ENST00000463407 SHROOM3Q8TF72 1996 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 TOX3O15405 576 aaPredicted RBP11.6□□□□□ -0.55
NUP58-206ENST00000463407 RNPS1Q15287 305 aaKnown RBP11.6□□□□□ -0.55
NUP58-206ENST00000463407 ZNF674Q2M3X9 581 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 CARFQ8N187 725 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 COX14Q96I36 57 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 TMEM43Q9BTV4 400 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 ZAR1LA6NP61 321 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 CCL4P13236 92 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 CHATP28329 748 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 SSTR2P30874 369 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 RAB13P51153 203 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 RAE1P78406 368 aaKnown RBP11.6□□□□□ -0.55
NUP58-206ENST00000463407 SPINK14Q6IE38 97 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 SIAH3Q8IW03 269 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 GPR87Q9BY21 358 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 PBOV1Q9GZY1 135 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 RIMS4Q9H426 269 aaPredicted RBP11.6□□□□□ -0.55
NUP58-206ENST00000463407 KCNE3Q9Y6H6 103 aa11.6□□□□□ -0.55
NUP58-206ENST00000463407 MEIKINA0A087WXM9 373 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 A0A1W2PR80 420 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 TMEM129A0AVI4 362 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 ANXA7P20073 488 aaKnown RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 RAB6AP20340 208 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CTU2Q2VPK5 515 aaKnown RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 SOWAHCQ53LP3 525 aaPredicted RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 ZNF546Q86UE3 836 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 LSRQ86X29 649 aaPredicted RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 OR52H1Q8NGJ2 320 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 NARFLQ9H6Q4 476 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 ERVMER34-1Q9H9K5 563 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 TFAP2AP05549 437 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 OR8U8P0C7N1 319 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 KIR2DL1P43626 348 aaPredicted RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 SOX8P57073 446 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 ATPAF1Q5TC12 328 aaPredicted RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 FAM219BQ5XKK7 198 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 WDR74Q6RFH5 385 aaPredicted RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 FAM26EQ8N5C1 309 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 ZNF321PQ8N8H1 164 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 PSD2Q9BQI7 771 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 FN3KRPQ9HA64 309 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.59□□□□□ -0.55
NUP58-206ENST00000463407 GDF2Q9UK05 429 aaPredicted RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 SLCO1B1Q9Y6L6 691 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 ZIC2O95409 532 aaPredicted RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 SRPXP78539 464 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 HNF4GQ14541 408 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 GSG1Q2KHT4 349 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 KLHDC8BQ8IXV7 354 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 MALSU1Q96EH3 234 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 FOXB1Q99853 325 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 ANKRD12Q6UB98 2062 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 COL4A5P29400 1685 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 LRP5LA4QPB2 252 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 HPP00738 406 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CLEC3BP05452 202 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CT45A6P0DMU7 189 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CT45A5P0DMU8 189 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CT45A7P0DMV0 189 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CT45A8P0DMV1 189 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CT45A9P0DMV2 189 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 PSMB1P20618 241 aaKnown RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 ISL1P61371 349 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 S100A12P80511 92 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 HTD2P86397 168 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CT45A2Q5DJT8 189 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CT45A1Q5HYN5 189 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 PLXDC2Q6UX71 529 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 TFAP2EQ6VUC0 442 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 ZNF793Q6ZN11 406 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CT45A3Q8NHU0 189 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 SLC38A1Q9H2H9 487 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 LY75O60449 1722 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 K7EPK0 472 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 LGALS8O00214 317 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 APEX1P27695 318 aaKnown RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 ETV6P41212 452 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 YBX1P67809 324 aaKnown RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 EGR3Q06889 387 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 CST9LP1Q5W188 147 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 FAM71E2Q8N5Q1 922 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 RDH5Q92781 318 aa11.59□□□□□ -0.55
NUP58-206ENST00000463407 HEYLQ9NQ87 328 aaPredicted RBP11.59□□□□□ -0.55
NUP58-206ENST00000463407 PLXNB2O15031 1838 aa11.58□□□□□ -0.55
NUP58-206ENST00000463407 MDFIC2A0A1B0GVS7 189 aa11.58□□□□□ -0.56
NUP58-206ENST00000463407 AADACL4Q5VUY2 407 aa11.58□□□□□ -0.56
NUP58-206ENST00000463407 TMEM200AQ86VY9 491 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms