RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ZNF823P16415 610 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 SPI1P17947 270 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 PRKACGP22612 351 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 FASP25445 335 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 GIFP27352 417 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 MPV17P39210 176 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 NR4A2P43354 598 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 RGS6P49758 472 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 BLVRAP53004 296 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 MRPS11P82912 194 aaKnown RBP14.81□□□□□ -0.04
USP39-208ENST00000455732 ECH1Q13011 328 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 PCK2Q16822 640 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 PCGF3Q3KNV8 242 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 TMEM255AQ5JRV8 349 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 CORO6Q6QEF8 472 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 CFAP77Q6ZQR2 320 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 PARP8Q8N3A8 854 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 ZNF540Q8NDQ6 660 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 OR9Q1Q8NGQ5 310 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 UBASH3BQ8TF42 649 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 ZNRF4Q8WWF5 429 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 CDADC1Q9BWV3 514 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 PNRC2Q9NPJ4 139 aaKnown RBP14.81□□□□□ -0.04
USP39-208ENST00000455732 NKIRAS2Q9NYR9 191 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 COMMD3-BMI1R4GMX3 469 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 MT-ND5P03915 603 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 DBHP09172 617 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 USF1P22415 310 aaPredicted RBP14.8□□□□□ -0.04
USP39-208ENST00000455732 FMO3P31513 532 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 MMP15P51511 669 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 CDK5Q00535 292 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 GINS1Q14691 196 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 TEX30Q5JUR7 227 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 ACSM5Q6NUN0 579 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 HIPK1Q86Z02 1210 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 LINC00346Q8IVM7 164 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 OR2AJ1Q8NGZ0 328 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 SLC7A6Q92536 515 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 GABARAPL1Q9H0R8 117 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 SLC25A19Q9HC21 320 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 PAPOLBQ9NRJ5 636 aaKnown RBP14.8□□□□□ -0.04
USP39-208ENST00000455732 KIF17Q9P2E2 1029 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 GRIP1Q9Y3R0 1128 aa14.8□□□□□ -0.04
USP39-208ENST00000455732 EBAG9O00559 213 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 SURF4O15260 269 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 CRLF1O75462 422 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 NCR1O76036 304 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 HMGN1P05114 100 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 GYPBP06028 91 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 ADH4P08319 380 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 POU1F1P28069 291 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 LIPAP38571 399 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 DAPP51397 102 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 RSPO1Q2MKA7 263 aaPredicted RBP14.79□□□□□ -0.04
USP39-208ENST00000455732 ALKBH6Q3KRA9 238 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 LINC01590Q5TEZ4 76 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 TMEM154Q6P9G4 183 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 LYPD4Q6UWN0 246 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 COLCA1Q6ZS62 124 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 PRIMA1Q86XR5 153 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 OR51L1Q8NGJ5 315 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 MAP6Q96JE9 813 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 PITX2Q99697 317 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 ATF6BQ99941 703 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 BPESC1Q9GZL8 116 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 CYSLTR2Q9NS75 346 aa14.79□□□□□ -0.04
USP39-208ENST00000455732 DDX28Q9NUL7 540 aaKnown RBP14.79□□□□□ -0.04
USP39-208ENST00000455732 TVP23AA6NH52 213 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 HPXP02790 462 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 CLUP10909 449 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 PAICSP22234 425 aaKnown RBP14.78□□□□□ -0.04
USP39-208ENST00000455732 ENTPD1P49961 510 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 ZNF81P51508 661 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 ACTR3P61158 418 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 PSG7Q13046 419 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 RIN1Q13671 783 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 CARTPTQ16568 116 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 ZMAT1Q5H9K5 638 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 FAM209AQ5JX71 171 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 C6orf52Q5T4I8 152 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 OR10S1Q8NGN2 331 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 RDH5Q92781 318 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 PTP4A1Q93096 173 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 APOBEC3DQ96AK3 386 aaPredicted RBP14.78□□□□□ -0.04
USP39-208ENST00000455732 HCAR1Q9BXC0 346 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 C1QTNF5Q9BXJ0 243 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 POFUT1Q9H488 388 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 WDR76Q9H967 626 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 CHODLQ9H9P2 273 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 YAE1D1Q9NRH1 226 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 STARD10Q9Y365 291 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 ATRQ13535 2644 aa14.78□□□□□ -0.04
USP39-208ENST00000455732 IGHV4-61A0A0C4DH41 118 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 PLSCR5A0PG75 271 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 FAM183AA6NL82 134 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 G3V2T6 193 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 GLCEO94923 617 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 ACSM4P0C7M7 580 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 IGHV4-31P0DP07 118 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 PSKH1P11801 424 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms