RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 MPPED2Q15777 294 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MOGQ16653 247 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 VMACQ2NL98 169 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ZNF404Q494X3 552 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CYBRD1Q53TN4 286 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GPR157Q5UAW9 335 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OLFML2AQ68BL7 652 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SFRP4Q6FHJ7 346 aaPredicted RBP4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ASPHD2Q6ICH7 369 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TBPL2Q6SJ96 375 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FOXL2NBQ6ZUU3 175 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C9orf139Q6ZV77 190 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 HDDC2Q7Z4H3 204 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LINC00346Q8IVM7 164 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SLC30A8Q8IWU4 369 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LNX2Q8N448 690 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PNKDQ8N490 385 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C11orf44Q8N8P7 122 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NPEPL1Q8NDH3 523 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR8B3Q8NGG8 313 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR4F5Q8NH21 305 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LRRC8CQ8TDW0 803 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RAB40AQ8WXH6 277 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NEIL1Q96FI4 390 aaPredicted RBP4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SAMD8Q96LT4 415 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TSSK2Q96PF2 358 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR8B2Q96RD0 313 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ALG12Q9BV10 488 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SLITRK2Q9H156 845 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SYT4Q9H2B2 425 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MMP27Q9H306 513 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FN3KQ9H479 309 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ELOVL3Q9HB03 270 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TMEM165Q9HC07 324 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TMBIM4Q9HC24 238 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CLN8Q9UBY8 286 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CGGBP1Q9UFW8 167 aaPredicted RBP4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RAB21Q9UL25 225 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NDRG4Q9ULP0 352 aaKnown RBP4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 HIF3AQ9Y2N7 669 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 POLR3KQ9Y2Y1 108 aaPredicted RBP4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NDUFAF1Q9Y375 327 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TIMM10BQ9Y5J6 103 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GMEB1Q9Y692 573 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SACSQ9NZJ4 4579 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 IGHV3OR15-7A0A075B7D8 119 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ELOVL7A1L3X0 281 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NPIPB13A6NJU9 1138 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 POM121CA8CG34 1229 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 EFCAB9A8MZ26 197 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CENPBD1B2RD01 187 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NPIPB4C9JG80 1138 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 M0QZ24 198 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DCTN6O00399 190 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FFAR1O14842 300 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR10H3O60404 316 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SLC16A7O60669 478 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CRYBA1P05813 215 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TSPAN19P0C672 248 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PSKH1P11801 424 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PAX6P26367 422 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RPS27P42677 84 aaKnown RBP4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RBM34P42696 430 aaKnown RBP4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CENPAP49450 140 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PCBD1P61457 104 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 EGR3Q06889 387 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SCRN3Q0VDG4 424 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 KLRD1Q13241 179 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CCDC92Q53HC0 331 aaPredicted RBP4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TTMPQ5BVD1 217 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CLEC12AQ5QGZ9 265 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 WDR25Q64LD2 544 aaPredicted RBP4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CFAP77Q6ZQR2 320 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ZNF826PQ6ZT77 177 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PTCHD4Q6ZW05 846 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NLRC3Q7RTR2 1065 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OAFQ86UD1 273 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ALDH16A1Q8IZ83 802 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LYG1Q8N1E2 194 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DPP10Q8N608 796 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR1F12Q8NHA8 337 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LINC01006Q8NI28 216 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LHX4Q969G2 390 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FAM46AQ96IP4 442 aaKnown RBP4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PRRC1Q96M27 445 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ZNF570Q96NI8 536 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CCDC28BQ9BUN5 200 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RASSF4Q9H2L5 321 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 BEX1Q9HBH7 125 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ADA2Q9NZK5 511 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 IL19Q9UHD0 177 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A4GNTQ9UNA3 340 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 COA3Q9Y2R0 106 aaPredicted RBP4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SIGLEC9Q9Y336 463 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RNF114Q9Y508 228 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LHFPL6Q9Y693 200 aa4.97□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PLXNB1O43157 2135 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 A0A0G2JND7 137 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CENPVL3A0A0U1RRI6 287 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CLPSL1A2RUU4 121 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms