RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 PDGFBP01127 241 aaPredicted RBP12.7□□□□□ -0.38
ITGB4-202ENST00000449880 APOA2P02652 100 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 GSTP1P09211 210 aaKnown RBP12.7□□□□□ -0.38
ITGB4-202ENST00000449880 PSMB5P28074 263 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
ITGB4-202ENST00000449880 PNLIPRP3Q17RR3 467 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF626Q68DY1 528 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 SLC16A14Q7RTX9 510 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 RBM45Q8IUH3 476 aaKnown RBP12.7□□□□□ -0.38
ITGB4-202ENST00000449880 VRK3Q8IV63 474 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 TEX19Q8NA77 164 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 TPPP2P59282 170 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 C19orf47Q8N9M1 422 aaKnown RBP12.7□□□□□ -0.38
ITGB4-202ENST00000449880 VN1R2Q8NFZ6 395 aa12.7□□□□□ -0.38
ITGB4-202ENST00000449880 LINC01553A4QN01 128 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 PLPP1O14494 284 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 SNRPNP63162 240 aaKnown RBP12.69□□□□□ -0.38
ITGB4-202ENST00000449880 DCDP81605 110 aaKnown RBP12.69□□□□□ -0.38
ITGB4-202ENST00000449880 PLPP6Q8IY26 295 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 INSM2Q96T92 566 aaPredicted RBP12.69□□□□□ -0.38
ITGB4-202ENST00000449880 RHNO1Q9BSD3 238 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 SERTM1A2A2V5 107 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 DSCR3O14972 297 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 ANGPTL7O43827 346 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 CBX7O95931 251 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 CST4P01036 141 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 SSR4P51571 173 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 PDZD11Q5EBL8 140 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 FAM74A1Q5RGS3 127 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 SIGLECL1Q8N7X8 197 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 KIRREL1Q96J84 757 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 KCNJ15Q99712 375 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 KIR2DS1A0A191URI9 304 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 ASPDHA6ND91 283 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF727A8MUV8 499 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 KIR2DS4P43632 304 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 IL10RAQ13651 578 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 KIR2DS1Q14954 304 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 BCO1Q9HAY6 547 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 FOXJ3Q9UPW0 622 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 EXOGQ9Y2C4 368 aaKnown RBP12.69□□□□□ -0.38
ITGB4-202ENST00000449880 OR5K3A6NET4 321 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 SEC14L6B5MCN3 397 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 H3BNC9 293 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 CLDN1O95832 211 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 PNPP00491 289 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 CD3DP04234 171 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 SLC6A1P30531 599 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 SNRPEP62304 92 aaKnown RBP12.69□□□□□ -0.38
ITGB4-202ENST00000449880 Q3ZCU0 254 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 CD300LDQ6UXZ3 194 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 ANGPTL5Q86XS5 388 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 OR13D1Q8NGV5 346 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 GPX8Q8TED1 209 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 PIGCQ92535 297 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 TAS2R4Q9NYW5 299 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 SMCHD1A6NHR9 2005 aa12.69□□□□□ -0.38
ITGB4-202ENST00000449880 DHODHQ02127 395 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 TOMM34Q15785 309 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 NKG7Q16617 165 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 PCK2Q16822 640 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ADIPOR2Q86V24 386 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 IL1F10Q8WWZ1 152 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF426Q9BUY5 554 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 PLK3Q9H4B4 646 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF77Q15935 545 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 SSX1Q16384 188 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF511Q8NB15 262 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 SECTM1Q8WVN6 248 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 RASD2Q96D21 266 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 SCMH1Q96GD3 660 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 SLC23A2Q9UGH3 650 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 KCND3Q9UK17 655 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ATAD5Q96QE3 1844 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 AP4M1O00189 453 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ACKR3P25106 362 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 DCTDP32321 178 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 IGSF11Q5DX21 431 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 PTCRAQ6ISU1 281 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 SAT2Q96F10 170 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF331Q9NQX6 463 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 OSGIN2Q9Y236 505 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 FLVCR1Q9Y5Y0 555 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 V9GYH0 126 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 RRP8O43159 456 aaKnown RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 EIF4E2O60573 245 aaKnown RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF354AO60765 605 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 IGFBP1P08833 259 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 PCBP4P57723 403 aaKnown RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 GABREP78334 506 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ZP2Q05996 745 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 GPNMBQ14956 572 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 TMEM176BQ3YBM2 270 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 YOD1Q5VVQ6 348 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 AAED1Q7RTV5 226 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 HDAC8Q9BY41 377 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms