RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SIRPB1O00241 398 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 SLC2A10O95528 541 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 GNB3P16520 340 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ZNF626Q68DY1 528 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 RGS7BPQ6MZT1 257 aaPredicted RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 FAM213BQ8TBF2 198 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 SEH1LQ96EE3 360 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 CNRIP1Q96F85 164 aaPredicted RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 SLC25A19Q9HC21 320 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 PPIL1Q9Y3C6 166 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 STRCQ7RTU9 1775 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 TMEM200CA6NKL6 621 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 AGAP14A8MT82 685 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 K7EQM0 130 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 DHHO43323 396 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 SULT1C4O75897 302 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 RFX2P48378 723 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 RTL8BQ17RB0 113 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 PRAMEF5Q5TYX0 476 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 PRAMEF6Q5VXH4 476 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 IGHV1OR15-9A0A0B4J2B8 117 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 ARRDC5A6NEK1 342 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 ZAR1LA6NP61 321 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 BHLHE40O14503 412 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 SNRNP70P08621 437 aaKnown RBP9.25□□□□□ -0.93
SCN10A-201ENST00000449082 JUNBP17275 347 aaPredicted RBP9.25□□□□□ -0.93
SCN10A-201ENST00000449082 LIPAP38571 399 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 HNRNPFP52597 415 aaKnown RBP9.25□□□□□ -0.93
SCN10A-201ENST00000449082 INSM1Q01101 510 aaPredicted RBP9.25□□□□□ -0.93
SCN10A-201ENST00000449082 FJX1Q86VR8 437 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 SYS1Q8N2H4 156 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 FAM109AQ8N4B1 249 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 ANKRD53Q8N9V6 530 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 UBE2FQ969M7 185 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 OPA3Q9H6K4 179 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 R4GN57 208 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 LTBP4Q8N2S1 1624 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 SCN9AQ15858 1988 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 DFFBO76075 338 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 GPR12P47775 334 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 ELFN2Q5R3F8 820 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 TMPRSS7Q7RTY8 843 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 HPSE2Q8WWQ2 592 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 TXN2Q99757 166 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 COPS3Q9UNS2 423 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 MEIKINA0A087WXM9 373 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 METAP1P53582 386 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 CLINT1Q14677 625 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 TMEM217Q8N7C4 229 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 OR10K1Q8NGX5 313 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 PBOV1Q9GZY1 135 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 P4HTMQ9NXG6 502 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 TFAP2AP05549 437 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 HLA-DOBP13765 273 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 CPEP16870 476 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 PCSK6P29122 969 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 FAM74A1Q5RGS3 127 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 ADGRF3Q8IZF5 1079 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 DRAXINQ8NBI3 349 aaPredicted RBP9.25□□□□□ -0.93
SCN10A-201ENST00000449082 ZNF707Q96C28 371 aaPredicted RBP9.25□□□□□ -0.93
SCN10A-201ENST00000449082 S1PR3Q99500 378 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 NPAP1Q9NZP6 1156 aa9.25□□□□□ -0.93
SCN10A-201ENST00000449082 ZNF705FA8MVS1 300 aaPredicted RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 PPM1DO15297 605 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 NXPH3O95157 252 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 ZNF705DP0CH99 300 aaPredicted RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 ZNF705BP0CI00 300 aaPredicted RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 FOLR1P15328 257 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 TBPP20226 339 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 GNB1P62873 340 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 HABP2Q14520 560 aaPredicted RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 SLC38A9Q8NBW4 561 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 OR51A4Q8NGJ6 313 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 OR51H1Q8NH63 302 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 SLC35E1Q96K37 410 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 POFUT1Q9H488 388 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 EXOSC3Q9NQT5 275 aaKnown RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 TAS2R5Q9NYW4 299 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 SERGEFQ9UGK8 458 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 FAM96BQ9Y3D0 163 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 USP54Q70EL1 1684 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 SSPNQ14714 243 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 PCK2Q16822 640 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 TMEM200AQ86VY9 491 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 CARFQ8N187 725 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 OR52N5Q8NH56 324 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 GPBAR1Q8TDU6 330 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 CORO2AQ92828 525 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 GON7Q9BXV9 100 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 RANGRFQ9HD47 186 aaPredicted RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 FITM1A5D6W6 292 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 APEHP13798 732 aaKnown RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 B4GALT1P15291 398 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 EPHA8P29322 1005 aaPredicted RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 TRIP6Q15654 476 aaKnown RBP9.24□□□□□ -0.93
SCN10A-201ENST00000449082 TRILQ7L0X0 811 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 SUMF1Q8NBK3 374 aa9.24□□□□□ -0.93
SCN10A-201ENST00000449082 NOXO1Q8NFA2 376 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms