RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RAD51CO43502 376 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 DPM1O60762 260 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 NDUFS6O75380 124 aaKnown RBP3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 SC5DO75845 299 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 AQP8O94778 261 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 IGHV3-48P01763 117 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 SEMG1P04279 462 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 CCDC166P0CW27 439 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 SERPINB8P50452 374 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 DLX1P56177 255 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 TWF1Q12792 350 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 CLINT1Q14677 625 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR7A5Q15622 319 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 TNXAQ16473 311 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 ATP6V1FQ16864 119 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 PAGE2BQ5JRK9 111 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF620Q6ZNG0 422 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 TRMT10CQ7L0Y3 403 aaKnown RBP3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 FAM220AQ7Z4H9 259 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF589Q86UQ0 364 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 TMEM252Q8N6L7 170 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 LINC00612Q8N6U2 182 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 SNX31Q8N9S9 440 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR6N2Q8NGY6 317 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 LGALS14Q8TCE9 139 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 SDR42E1Q8WUS8 393 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR8D1Q8WZ84 308 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 CENPNQ96H22 339 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 SERPINB12Q96P63 405 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF184Q99676 751 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 TSG101Q99816 390 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 C19orf24Q9BVV8 132 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 SYT4Q9H2B2 425 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 Q9H3A6 140 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 UBE2ZQ9H832 354 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 MS4A12Q9NXJ0 267 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 BTNL2Q9UIR0 455 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 A0A0C4DFX4 3053 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 CFAP65Q6ZU64 1925 aaKnown RBP3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 NKTRP30414 1462 aaKnown RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 IGKV1D-13A0A0B4J2D9 117 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 MGAT4DA6NG13 374 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF780AO75290 641 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 SNAPINO95295 136 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CATP04040 527 aaKnown RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 IGKV1-13P0DP09 117 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CSNK2A2P19784 350 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 RAB4AP20338 218 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZP3P21754 424 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 AK4P27144 223 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 SERPINB5P36952 375 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 GPX4P36969 197 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CRATP43155 626 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 SKP1P63208 163 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CSNK1G2P78368 415 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 EGFEM1PQ0D2K5 195 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 UNC119Q13432 240 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 SLC39A6Q13433 755 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 NRF1Q16656 503 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 NDUFAF6Q330K2 333 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZBED5Q49AG3 693 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 SLC25A30Q5SVS4 291 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 TPTE2P1Q5T6R2 138 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 RNLSQ5VYX0 342 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 PEX26Q7Z412 305 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 UNC93AQ86WB7 457 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CBLN2Q8IUK8 224 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZADH2Q8N4Q0 377 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 DUSP18Q8NEJ0 188 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 TMEM239Q8WW34 195 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CDKL2Q92772 493 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 COL21A1Q96P44 957 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 SH3GL3Q99963 347 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 UTP23Q9BRU9 249 aaKnown RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CNPY3Q9BT09 278 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CALN1Q9BXU9 219 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 KCNJ16Q9NPI9 418 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR2S2Q9NQN1 319 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 XCL2Q9UBD3 114 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 APOBEC3BQ9UH17 382 aaKnown RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 CLEC2DQ9UHP7 191 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 MRM2Q9UI43 246 aaKnown RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 VSIG4Q9Y279 399 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ASF1AQ9Y294 204 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ATP6V1DQ9Y5K8 247 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ADAMTS9Q9P2N4 1935 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZC3H13Q5T200 1668 aaKnown RBP3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 ITSN2Q9NZM3 1697 aa3.3□□□□□ -1.88
HMGB1P48-201ENST00000446155 PLXNC1O60486 1568 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 SAMD9LQ8IVG5 1584 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 SLIT1O75093 1534 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 ARHGAP35Q9NRY4 1499 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 A0A0B4J2A0 478 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 HACD1B0YJ81 288 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 H0YHG0 523 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 RNASEK-C17orf49H0YIS7 233 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 ERI3O43414 337 aaKnown RBP3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 SCN2BO60939 215 aa3.29□□□□□ -1.88
HMGB1P48-201ENST00000446155 NIPSNAP2O75323 286 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms