RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 HIST2H3PS2Q5TEC6 136 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 SEZ6L2Q6UXD5 910 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 LRRN1Q6UXK5 716 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 HIST2H3AQ71DI3 136 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 SSX6Q7RTT6 188 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 ZNF584Q8IVC4 421 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 STX19Q8N4C7 294 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 OR10S1Q8NGN2 331 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 OR2T27Q8NH04 317 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 OR1F12Q8NHA8 337 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 ST7LQ8TDW4 575 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 SGCDQ92629 289 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 COPS4Q9BT78 406 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 WACQ9BTA9 647 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 NGBQ9NPG2 151 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 PLCXD1Q9NUJ7 323 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 PSORS1C1Q9UIG5 152 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 IKZF2Q9UKS7 526 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 TMEM14AQ9Y6G1 99 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 A0A1W2PPR1 153 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 C5orf49A4QMS7 147 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 SYNGR3O43761 229 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 SERPINA5P05154 406 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 DBHP09172 617 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 H2BFMP0C1H6 154 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 EPXP11678 715 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 ZNF14P17017 642 aaPredicted RBP14.92□□□□□ -0.02
LIME1-202ENST00000444951 ALOX5APP20292 161 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 EEF1B2P24534 225 aaKnown RBP14.92□□□□□ -0.02
LIME1-202ENST00000444951 DNASE1P24855 282 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 STOMP27105 288 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 SLC15A1P46059 708 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 GDI2P50395 445 aaKnown RBP14.92□□□□□ -0.02
LIME1-202ENST00000444951 CSNK2BP67870 215 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 ST3GAL4Q11206 333 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 ZNF322Q6U7Q0 402 aaPredicted RBP14.92□□□□□ -0.02
LIME1-202ENST00000444951 PAMR1Q6UXH9 720 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 KRT77Q7Z794 578 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 LHFPL3Q86UP9 236 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 ACBD7Q8N6N7 88 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 SLC30A7Q8NEW0 376 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 PIK3IP1Q96FE7 263 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 PLPPR2Q96GM1 343 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 TMEM80Q96HE8 168 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 RADILQ96JH8 1075 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 ZNF75AQ96N20 296 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 ATF6BQ99941 703 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 HDHD2Q9H0R4 259 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 GSX1Q9H4S2 264 aaPredicted RBP14.92□□□□□ -0.02
LIME1-202ENST00000444951 PNRC2Q9NPJ4 139 aaKnown RBP14.92□□□□□ -0.02
LIME1-202ENST00000444951 SLCO1C1Q9NYB5 712 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 TPRKBQ9Y3C4 175 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 PCDHGB1Q9Y5G3 927 aa14.92□□□□□ -0.02
LIME1-202ENST00000444951 LOC100509620A0A075B734 347 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 IRGMA1A4Y4 181 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 DPRXA6NFQ7 191 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 PRR32B1ATL7 298 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 ZNF878C9JN71 531 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 F5H5K5 113 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 ATE1O95260 518 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 PTHP01270 115 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 IGKV3-15P01624 115 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 ADRA2AP08913 450 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 CRYGSP22914 178 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 ACTC1P68032 377 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 ACTA1P68133 377 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 MVKQ03426 396 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 ZNF85Q03923 595 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 BSPH1Q075Z2 132 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 SPOCK1Q08629 439 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 TBC1D28Q2M2D7 210 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 RBM48Q5RL73 367 aaKnown RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 KCTD18Q6PI47 426 aaPredicted RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 TMEM108Q6UXF1 575 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 SSX8Q7RTT4 187 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 SNX33Q8WV41 574 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 ASB17Q8WXJ9 295 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 MNTQ99583 582 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 KCNS3Q9BQ31 491 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 OR51B6Q9H340 312 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 PLEKHF2Q9H8W4 249 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 CDH20Q9HBT6 801 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 MOV10Q9HCE1 1003 aaKnown RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 FGF20Q9NP95 211 aaPredicted RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 DLL4Q9NR61 685 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 MRPS18AQ9NVS2 196 aaKnown RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 PAK1IP1Q9NWT1 392 aaPredicted RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 CNOT2Q9NZN8 540 aaKnown RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 ERVK-18Q9QC07 812 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 CRNNQ9UBG3 495 aaPredicted RBP14.91□□□□□ -0.02
LIME1-202ENST00000444951 FBXL3Q9UKT7 428 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 N6AMT1Q9Y5N5 214 aa14.91□□□□□ -0.02
LIME1-202ENST00000444951 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.9□□□□□ -0.02
LIME1-202ENST00000444951 OR6C6A6NF89 314 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 J3QRE1 110 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 PHYHO14832 338 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 IGLV1-44P01699 117 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 CCDC159P0C7I6 412 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms