RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 RIIAD1A6NNX1 92 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 DEAF1O75398 565 aaPredicted RBP20.17■□□□□ 0.82
VARS-217ENST00000440048 MT-ND5P03915 603 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 GYPBP06028 91 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 ANXA8P13928 327 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 ZNF823P16415 610 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 COL8A2P25067 703 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 POU1F1P28069 291 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 GRK5P34947 590 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 MMP15P51511 669 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 RIN1Q13671 783 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 SHQ1Q6PI26 577 aaKnown RBP20.17■□□□□ 0.82
VARS-217ENST00000440048 LYPD4Q6UWN0 246 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 KCNG2Q9UJ96 466 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 INAFM1C9JVW0 142 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 CLUP10909 449 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 OSMP13725 252 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 ZNF3P17036 446 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 SPI1P17947 270 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 TUBG1P23258 451 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 ZNF81P51508 661 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 CCL8P80075 99 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 PSG7Q13046 419 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 CCNIQ14094 377 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 RSPO1Q2MKA7 263 aaPredicted RBP20.16■□□□□ 0.82
VARS-217ENST00000440048 PCGF3Q3KNV8 242 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 ACSM5Q6NUN0 579 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 ATG16L2Q8NAA4 619 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 RDH5Q92781 318 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 YIPF5Q969M3 257 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 NRBF2Q96F24 287 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 PITX2Q99697 317 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 TUBG2Q9NRH3 451 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 NKIRAS2Q9NYR9 191 aa20.16■□□□□ 0.82
VARS-217ENST00000440048 ANK3Q12955 4377 aaKnown RBP20.16■□□□□ 0.82
VARS-217ENST00000440048 RPS27P42677 84 aaKnown RBP20.15■□□□□ 0.82
VARS-217ENST00000440048 GINS1Q14691 196 aa20.15■□□□□ 0.82
VARS-217ENST00000440048 KRTAP27-1Q3LI81 207 aa20.15■□□□□ 0.82
VARS-217ENST00000440048 SLC27A4Q6P1M0 643 aa20.15■□□□□ 0.82
VARS-217ENST00000440048 ASRGL1Q7L266 308 aa20.15■□□□□ 0.82
VARS-217ENST00000440048 MAP6Q96JE9 813 aa20.15■□□□□ 0.82
VARS-217ENST00000440048 COG8Q96MW5 612 aa20.15■□□□□ 0.82
VARS-217ENST00000440048 PNRC2Q9NPJ4 139 aaKnown RBP20.15■□□□□ 0.82
VARS-217ENST00000440048 COMMD3-BMI1R4GMX3 469 aa20.15■□□□□ 0.82
VARS-217ENST00000440048 PLSCR5A0PG75 271 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 ZSCAN5BA6NJL1 495 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 TLX2O43763 284 aaPredicted RBP20.14■□□□□ 0.81
VARS-217ENST00000440048 PSKH1P11801 424 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 ACHEP22303 614 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 FMO3P31513 532 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 RGS6P49758 472 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 MRPS11P82912 194 aaKnown RBP20.14■□□□□ 0.81
VARS-217ENST00000440048 ECH1Q13011 328 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 TSTQ16762 297 aaKnown RBP20.14■□□□□ 0.81
VARS-217ENST00000440048 ZNF511Q8NB15 262 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 CMBLQ96DG6 245 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 ATF6BQ99941 703 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 HCAR1Q9BXC0 346 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 MED20Q9H944 212 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 WDR76Q9H967 626 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 CHODLQ9H9P2 273 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 YAE1D1Q9NRH1 226 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 CYSLTR2Q9NS75 346 aa20.14■□□□□ 0.81
VARS-217ENST00000440048 MALRD1Q5VYJ5 2156 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 FAM183AA6NL82 134 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 J3QW42 95 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 SPRY3O43610 288 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 TIMM8AO60220 97 aaPredicted RBP20.13■□□□□ 0.81
VARS-217ENST00000440048 IGHV1-46P01743 117 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 IGHV4-31P0DP07 118 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 ZNF23P17027 643 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 LIPAP38571 399 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 CDK5Q00535 292 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 ATP6AP1Q15904 470 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 OR5K1Q8NHB7 308 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 PTP4A1Q93096 173 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 APOBEC3DQ96AK3 386 aaPredicted RBP20.13■□□□□ 0.81
VARS-217ENST00000440048 DUS3LQ96G46 650 aaKnown RBP20.13■□□□□ 0.81
VARS-217ENST00000440048 DECR2Q9NUI1 292 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 CGGBP1Q9UFW8 167 aaPredicted RBP20.13■□□□□ 0.81
VARS-217ENST00000440048 PURGQ9UJV8 347 aaKnown RBP20.13■□□□□ 0.81
VARS-217ENST00000440048 AP4S1Q9Y587 144 aa20.13■□□□□ 0.81
VARS-217ENST00000440048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.12■□□□□ 0.813e-8■■■□□ 17.1
VARS-217ENST00000440048 F5H5K5 113 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 LILRA1O75019 489 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 RP2O75695 350 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 CIB2O75838 187 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 TACSTD2P09758 323 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 ACSM4P0C7M7 580 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 KITLGP21583 273 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 ENTPD1P49961 510 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 LINC01590Q5TEZ4 76 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 FAHD1Q6P587 224 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 CCDC121Q6ZUS5 278 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 OR5L1Q8NGL2 311 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 OR10S1Q8NGN2 331 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 OR6K6Q8NGW6 343 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 OTULINQ96BN8 352 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 HAVCR1Q96D42 359 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 MSL2Q9HCI7 577 aa20.12■□□□□ 0.81
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