RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ARL4DP49703 201 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CLEC9AQ6UXN8 241 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 PGAP1Q75T13 922 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 MAMDC2Q7Z304 686 aaPredicted RBP8.15□□□□□ -1.1
COPB1-202ENST00000439561 DCXRQ7Z4W1 244 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CDC20BQ86Y33 519 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 OR5H2Q8NGV7 314 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 S100PBPQ96BU1 408 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 PHYHIPLQ96FC7 376 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CLCC1Q96S66 551 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 PFDN5Q99471 154 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 NUDT9Q9BW91 350 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 OR11A1Q9GZK7 315 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 FN3KRPQ9HA64 309 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 TAF9BQ9HBM6 251 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 NPIPA5E9PKD4 350 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CRTAPO75718 401 aaPredicted RBP8.15□□□□□ -1.1
COPB1-202ENST00000439561 AHSA1O95433 338 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CTSBP07858 339 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 MUC1P15941 1255 aaPredicted RBP8.15□□□□□ -1.1
COPB1-202ENST00000439561 RBMXP38159 391 aaKnown RBP8.15□□□□□ -1.1
COPB1-202ENST00000439561 RAB38P57729 211 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CSNK2A1P68400 391 aaPredicted RBP8.15□□□□□ -1.1
COPB1-202ENST00000439561 PLAURQ03405 335 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 GLO1Q04760 184 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 EGR3Q06889 387 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CLINT1Q14677 625 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 TSC22D1Q15714 1073 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 VWA2Q5GFL6 755 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 TANGO2Q6ICL3 276 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 TMEM184AQ6ZMB5 413 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 Q6ZRG5 221 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 SLC43A2Q8N370 569 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CSNK2A3Q8NEV1 391 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 OR13C8Q8NGS7 320 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 NT5CQ8TCD5 201 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 THAP3Q8WTV1 239 aaPredicted RBP8.15□□□□□ -1.1
COPB1-202ENST00000439561 TCTEX1D2Q8WW35 142 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 PIK3IP1Q96FE7 263 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 CAPNS2Q96L46 248 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 OR8B4Q96RC9 309 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 ABHD6Q9BV23 337 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 UBQLN4Q9NRR5 601 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 MIOXQ9UGB7 285 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 NPIPA1Q9UND3 350 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 MEMO1Q9Y316 297 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 MPDZO75970 2070 aa8.15□□□□□ -1.11
COPB1-202ENST00000439561 TRBV5-5A0A0J9YX44 114 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 CRHP06850 196 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 HOXB2P14652 356 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 ADCYAP1P18509 176 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 RCC1P18754 421 aaPredicted RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 HSD11B1P28845 292 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 CHAF1BQ13112 559 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 CEBPEQ15744 281 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 RPL7L1Q6DKI1 246 aaKnown RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 FAM109BQ6ICB4 259 aaPredicted RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 ANGPTL5Q86XS5 388 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 SECTM1Q8WVN6 248 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 TAAR8Q969N4 342 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 NUDT22Q9BRQ3 303 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 MFRPQ9BY79 579 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 SLCO5A1Q9H2Y9 848 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 POLE3Q9NRF9 147 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 THAP10Q9P2Z0 257 aaPredicted RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 SLC17A4Q9Y2C5 497 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 LRP12Q9Y561 859 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 PUS1Q9Y606 427 aaKnown RBP eCLIP8.14□□□□□ -1.11
COPB1-202ENST00000439561 C5orf42Q9H799 3197 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 hCG_1809904A0A1W2PP81 198 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 A0A1W2PPC1 479 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 A0A1W2PR64 198 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 A0A1W2PRV1 198 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 C2orf72A6NCS6 295 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 A6NLC8 198 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 CYR61O00622 381 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 TIMP1P01033 207 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 IFNA4P05014 189 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 PTAFRP25105 342 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 CAMLGP49069 296 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 PNLIPRP2P54317 469 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 F2RL1P55085 397 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 FHL5Q5TD97 284 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 NPSR1Q6W5P4 371 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 NUP54Q7Z3B4 507 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 OR4D6Q8NGJ1 314 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 OR51F2Q8NH61 342 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 MFSD8Q8NHS3 518 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 ST7LQ8TDW4 575 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 RSC1A1Q92681 617 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 ANKRD9Q96BM1 317 aaPredicted RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 CDC6Q99741 560 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 MMP26Q9NRE1 261 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 OR52A1Q9UKL2 312 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 SLC33A1O00400 549 aaPredicted RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 UTS2O95399 124 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 ARG1P05089 322 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 PET100P0DJ07 73 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 NME1P15531 152 aaKnown RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 ABCD3P28288 659 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms