RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 OR4D6Q8NGJ1 314 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 ASB5Q8WWX0 329 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 EDAQ92838 391 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 CLCC1Q96S66 551 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 MMP25Q9NPA2 562 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 DHDHQ9UQ10 334 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 COL4A2P08572 1712 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 F2RL1P55085 397 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 S100A12P80511 92 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 KLHL26Q53HC5 615 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 RNASE10Q5GAN6 216 aaKnown RBP12.16□□□□□ -0.46
PCNX3-202ENST00000439247 TRAPPC6BQ86SZ2 158 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 SLC43A2Q8N370 569 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 SLC25A44Q96H78 314 aaPredicted RBP12.16□□□□□ -0.46
PCNX3-202ENST00000439247 SPSB2Q99619 263 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 NRIP2Q9BQI9 281 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 NAA11Q9BSU3 229 aaPredicted RBP12.16□□□□□ -0.46
PCNX3-202ENST00000439247 APOOQ9BUR5 198 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 PARP12Q9H0J9 701 aaKnown RBP12.16□□□□□ -0.46
PCNX3-202ENST00000439247 HIF3AQ9Y2N7 669 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 TMEM127O75204 238 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 STK17BO94768 372 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 CRHP06850 196 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 CT45A8P0DMV1 189 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 CT45A9P0DMV2 189 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 PSMB6P28072 239 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 ACTR1BP42025 376 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 ACTR1AP61163 376 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 BTG2P78543 158 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 RASGEF1BQ0VAM2 473 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 ZNHIT3Q15649 155 aaPredicted RBP12.15□□□□□ -0.46
PCNX3-202ENST00000439247 CT45A2Q5DJT8 189 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 TMEM196Q5HYL7 178 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 OR2I1PQ8NGU4 316 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 MITD1Q8WV92 249 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 OR1E3Q8WZA6 343 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 RERGQ96A58 199 aaPredicted RBP12.15□□□□□ -0.46
PCNX3-202ENST00000439247 C14orf79Q96F83 325 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 VSTM2LQ96N03 204 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 GPX7Q96SL4 187 aaPredicted RBP12.15□□□□□ -0.46
PCNX3-202ENST00000439247 PHB2Q99623 299 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 RHOFQ9HBH0 211 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 OR5AC2Q9NZP5 309 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 PCNX3Q9H6A9 2034 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 NPIPB9F8W1W9 429 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 PMP2P02689 132 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 TPT1P13693 172 aaKnown RBP12.15□□□□□ -0.46
PCNX3-202ENST00000439247 COL9A1P20849 921 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 SLC17A1Q14916 467 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 PEA15Q15121 130 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 PTCRAQ6ISU1 281 aaPredicted RBP12.15□□□□□ -0.46
PCNX3-202ENST00000439247 BCORP1Q8N888 145 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 OTOSQ8NHW6 89 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 MARCH1Q8TCQ1 289 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 RNF141Q8WVD5 230 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 ASB13Q8WXK3 278 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 ZFYVE21Q9BQ24 234 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 RSRP1Q9BUV0 290 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 SLC17A9Q9BYT1 436 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 BCL2L14Q9BZR8 327 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 RCC2Q9P258 522 aaKnown RBP12.15□□□□□ -0.46
PCNX3-202ENST00000439247 MRPS33Q9Y291 106 aaKnown RBP12.15□□□□□ -0.46
PCNX3-202ENST00000439247 CFAP54Q96N23 3096 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 DMDP11532 3685 aa12.15□□□□□ -0.46
PCNX3-202ENST00000439247 PRSS38A1L453 326 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 NDUFS6O75380 124 aaKnown RBP12.15□□□□□ -0.47
PCNX3-202ENST00000439247 SFTA3P0C7M3 94 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.47
PCNX3-202ENST00000439247 ADH6P28332 368 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 NR0B1P51843 470 aaKnown RBP12.15□□□□□ -0.47
PCNX3-202ENST00000439247 SCAND1P57086 179 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 RNF144BQ7Z419 303 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 TAAR8Q969N4 342 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 ISOC2Q96AB3 205 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 RBM18Q96H35 190 aaKnown RBP12.15□□□□□ -0.47
PCNX3-202ENST00000439247 SEC11CQ9BY50 192 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 LYRM4Q9HD34 91 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 TMEM100Q9NV29 134 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 PCDHGA1Q9Y5H4 931 aa12.15□□□□□ -0.47
PCNX3-202ENST00000439247 VPS13AQ96RL7 3174 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 URADA6NGE7 173 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 EFSO43281 561 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF432O94892 652 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 SERPINA5P05154 406 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 DAOP14920 347 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF44P15621 663 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 GNB3P16520 340 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 PPICP45877 212 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 SLC9A3R2Q15599 337 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF141Q15928 474 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 LPCAT3Q6P1A2 487 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF585AQ6P3V2 769 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 NAA40Q86UY6 237 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 LURAP1LQ8IV03 231 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 METTL27Q8N6F8 245 aaPredicted RBP12.14□□□□□ -0.47
PCNX3-202ENST00000439247 OR51F2Q8NH61 342 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF563Q8TA94 476 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 NUDT9Q9BW91 350 aa12.14□□□□□ -0.47
PCNX3-202ENST00000439247 SPACA6W5XKT8 324 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms