RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ACOXLQ9NUZ1 547 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 BABAM2Q9NXR7 383 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 PRRC2CQ9Y520 2896 aaKnown RBP18.05■□□□□ 0.48
CHD3-204ENST00000439235 IQCMA0A1B0GVH7 501 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 ZNF503-AS2A6NEH8 195 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 OR6C6A6NF89 314 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 MAGEB4O15481 346 aaPredicted RBP18.05■□□□□ 0.48
CHD3-204ENST00000439235 SYNGR3O43761 229 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 ZG16O60844 167 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 PPP3CBP16298 524 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 PSMB9P28065 219 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 CCKARP32238 428 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 DCTDP32321 178 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 ZNF829Q3KNS6 432 aaPredicted RBP18.05■□□□□ 0.48
CHD3-204ENST00000439235 MDP1Q86V88 176 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 KLBQ86Z14 1044 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 MUL1Q969V5 352 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 SPTSSAQ969W0 71 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 MUCL1Q96DR8 90 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 PELI1Q96FA3 418 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 NOX3Q9HBY0 568 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 ISYNA1Q9NPH2 558 aa18.05■□□□□ 0.48
CHD3-204ENST00000439235 FREM1Q5H8C1 2179 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 INTS1Q8N201 2190 aaKnown RBP18.04■□□□□ 0.48
CHD3-204ENST00000439235 CLDN14O95500 239 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 APOC1P02654 83 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 HSMCR30P0CW71 290 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 CBR1P16152 277 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 ACSM1Q08AH1 577 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 MLLT11Q13015 90 aaPredicted RBP18.04■□□□□ 0.48
CHD3-204ENST00000439235 LIPNQ5VXI9 398 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 ZNF544Q6NX49 715 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 ITLN2Q8WWU7 325 aaPredicted RBP18.04■□□□□ 0.48
CHD3-204ENST00000439235 COG8Q96MW5 612 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 MGLLQ99685 303 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 KCNJ15Q99712 375 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 SLC25A15Q9Y619 301 aa18.04■□□□□ 0.48
CHD3-204ENST00000439235 A0A1W2PR80 420 aa18.03■□□□□ 0.48
CHD3-204ENST00000439235 NKX2-6A6NCS4 301 aa18.03■□□□□ 0.48
CHD3-204ENST00000439235 INMTO95050 263 aa18.03■□□□□ 0.48
CHD3-204ENST00000439235 RPP14O95059 124 aaKnown RBP18.03■□□□□ 0.48
CHD3-204ENST00000439235 RPL5P46777 297 aaKnown RBP18.03■□□□□ 0.48
CHD3-204ENST00000439235 PSMA6P60900 246 aaKnown RBP18.03■□□□□ 0.48
CHD3-204ENST00000439235 PPA1Q15181 289 aa18.03■□□□□ 0.48
CHD3-204ENST00000439235 TIGD6Q17RP2 521 aa18.03■□□□□ 0.48
CHD3-204ENST00000439235 CCDC58Q4VC31 144 aa18.03■□□□□ 0.48
CHD3-204ENST00000439235 SYT6Q5T7P8 510 aaPredicted RBP18.03■□□□□ 0.48
CHD3-204ENST00000439235 FAM169BQ8N8A8 192 aa18.03■□□□□ 0.48
CHD3-204ENST00000439235 HSD17B8Q92506 261 aa18.03■□□□□ 0.48
CHD3-204ENST00000439235 SERPINA5P05154 406 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 TFAP2AP05549 437 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 CRYGSP22914 178 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 OTX1P32242 354 aaPredicted RBP18.02■□□□□ 0.48
CHD3-204ENST00000439235 APLNRP35414 380 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 TGM4P49221 684 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 TPTEP56180 551 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 SORDQ00796 357 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 RAB39AQ14964 217 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 ZNF283Q8N7M2 679 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 MOB1AQ9H8S9 216 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 R4GMQ9 66 aa18.02■□□□□ 0.48
CHD3-204ENST00000439235 M0R135 149 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 IGKV3-15P01624 115 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 STOMP27105 288 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 PSMB10P40306 273 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 ALDH3B2P48448 385 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 CX3CR1P49238 355 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 GDI2P50395 445 aaKnown RBP18.01■□□□□ 0.47
CHD3-204ENST00000439235 PRKXP51817 358 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 GALK2Q01415 458 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 TAB1Q15750 504 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 ARMCX4Q5H9R4 360 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 FDX2Q6P4F2 183 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 RPL22L1Q6P5R6 122 aaKnown RBP18.01■□□□□ 0.47
CHD3-204ENST00000439235 CPEB3Q8NE35 698 aaKnown RBP18.01■□□□□ 0.47
CHD3-204ENST00000439235 OR1J2Q8NGS2 313 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 UFD1Q92890 307 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 ZNF799Q96GE5 643 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 ZNF75AQ96N20 296 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 OPALINQ96PE5 141 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 DCLRE1CQ96SD1 692 aaKnown RBP18.01■□□□□ 0.47
CHD3-204ENST00000439235 DOK1Q99704 481 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 CRNNQ9UBG3 495 aaPredicted RBP18.01■□□□□ 0.47
CHD3-204ENST00000439235 GRIP1Q9Y3R0 1128 aa18.01■□□□□ 0.47
CHD3-204ENST00000439235 NCOA6Q14686 2063 aaPredicted RBP18.01■□□□□ 0.47
CHD3-204ENST00000439235 TMEM269A0A1B0GVZ9 245 aa18■□□□□ 0.47
CHD3-204ENST00000439235 F5H5K5 113 aa18■□□□□ 0.47
CHD3-204ENST00000439235 LOC110117498-PIK3R3F6TDL0 507 aa18■□□□□ 0.47
CHD3-204ENST00000439235 LALBAP00709 142 aa18■□□□□ 0.47
CHD3-204ENST00000439235 ZNF14P17017 642 aaPredicted RBP18■□□□□ 0.47
CHD3-204ENST00000439235 APEX1P27695 318 aaKnown RBP18■□□□□ 0.47
CHD3-204ENST00000439235 MMP16P51512 607 aa18■□□□□ 0.47
CHD3-204ENST00000439235 IDH3GP51553 393 aaPredicted RBP18■□□□□ 0.47
CHD3-204ENST00000439235 GP2P55259 537 aaKnown RBP18■□□□□ 0.47
CHD3-204ENST00000439235 BLMHQ13867 455 aa18■□□□□ 0.47
CHD3-204ENST00000439235 CDSNQ15517 529 aa18■□□□□ 0.47
CHD3-204ENST00000439235 TBC1D28Q2M2D7 210 aa18■□□□□ 0.47
CHD3-204ENST00000439235 KRTAP27-1Q3LI81 207 aa18■□□□□ 0.47
CHD3-204ENST00000439235 C3orf36Q3SXR2 165 aa18■□□□□ 0.47
CHD3-204ENST00000439235 DRAM2Q6UX65 266 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms