RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 STUMQ69YW2 141 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 TWF2Q6IBS0 349 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 ADNP2Q6IQ32 1131 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 IGFL1Q6UW32 110 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 ANGPTL8Q6UXH0 198 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 ZYG11AQ6WRX3 759 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 TMPRSS11AQ6ZMR5 421 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 MBOAT2Q6ZWT7 520 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 NIPA1Q7RTP0 329 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 KIR2DL5AQ8N109 375 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 GABRG1Q8N1C3 465 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 ZNF615Q8N8J6 731 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 COX18Q8N8Q8 333 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 APCDD1LQ8NCL9 501 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 OR5K2Q8NHB8 316 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 KIR2DL5BQ8NHK3 375 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 FAM110BQ8TC76 370 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 PIFOQ8TCI5 191 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 APH1BQ8WW43 257 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 KIFAP3Q92845 792 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 PTX4Q96A99 478 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 LRRC58Q96CX6 371 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 L3HYPDHQ96EM0 354 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 ZNF488Q96MN9 340 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 TIMM17AQ99595 171 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 SLC29A1Q99808 456 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 MTG1Q9BT17 334 aaPredicted RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 SIRT7Q9NRC8 400 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 CLN8Q9UBY8 286 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 OPN4Q9UHM6 478 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 PITPNC1Q9UKF7 332 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 RRP15Q9Y3B9 282 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 MRPS18BQ9Y676 258 aaKnown RBP1.25□□□□□ -2.21
CDC40-204ENST00000431461 ARID1AO14497 2285 aa1.25□□□□□ -2.21
CDC40-204ENST00000431461 FHOD3Q2V2M9 1422 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 PALLDQ8WX93 1383 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 NINLQ9Y2I6 1382 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 GAKO14976 1311 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 TET2Q6N021 2002 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 KCNE1BA0A087WTH5 132 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 IGHV3OR16-9A0A0B4J2B5 98 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 SPRR5A0A1B0GTR4 108 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 A0A1B0GUH1 482 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 GOLGA8JA6NMD2 632 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 ZNF850A8MQ14 1090 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 SPECC1L-ADORA2AF8WAN1 911 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 SMKR1H3BMG3 65 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 DNASE2O00115 360 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 CASQ2O14958 399 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 CLDN11O75508 207 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 LSM8O95777 96 aaKnown RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 PAHP00439 452 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 GLAP06280 429 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 ANXA5P08758 320 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 ACSM4P0C7M7 580 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 TLX1NBP0CAT3 122 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 GOLGA8HP0CJ92 632 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 ATF6P18850 670 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 PSMB5P28074 263 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 RBM34P42696 430 aaKnown RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 ZNF121P58317 390 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 PRR3P79522 188 aaKnown RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 SYCNQ0VAF6 134 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 ZNF816Q0VGE8 651 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 ZSCAN26Q16670 478 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 SPECC1LQ69YQ0 1117 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 ZFAND6Q6FIF0 208 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 RWDD4Q6NW29 188 aaKnown RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 FBXW12Q6X9E4 464 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 EIF3MQ7L2H7 374 aaKnown RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 MRPL55Q7Z7F7 128 aaKnown RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 MMAAQ8IVH4 418 aaKnown RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 CDKL3Q8IVW4 592 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 ZNF695Q8IW36 515 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 RIMKLAQ8IXN7 391 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 MICU2Q8IYU8 434 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 ZNF561Q8N587 486 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 PRELID2Q8N945 189 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 LYPD6BQ8NI32 183 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 LINC01560Q8TB33 94 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 C17orf50Q8WW18 174 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 FLYWCH2Q96CP2 140 aaKnown RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 C9orf72Q96LT7 481 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 PRRC1Q96M27 445 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 MYCBPQ99417 103 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 TEAD3Q99594 435 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 CHCHD7Q9BUK0 85 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 SCRT1Q9BWW7 348 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 ZNF717Q9BY31 904 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 ANKRD60Q9BZ19 345 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 OR51M1Q9H341 326 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 AUNIPQ9H7T9 357 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 VPS37BQ9H9H4 285 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 C20orf96Q9NUD7 363 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 CLN6Q9NWW5 311 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 RHBDL2Q9NX52 303 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 PDP1Q9P0J1 537 aaPredicted RBP1.24□□□□□ -2.21
CDC40-204ENST00000431461 SLC17A4Q9Y2C5 497 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 LRP4O75096 1905 aa1.24□□□□□ -2.21
CDC40-204ENST00000431461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms