RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 OTOGQ6ZRI0 2925 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 C5orf49A4QMS7 147 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 H0YAE9 185 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 J3QRE1 110 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 OVOL3O00110 214 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 GPRIN2O60269 458 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 CLIC3O95833 236 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 GNAO1P09471 354 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 SPARCP09486 303 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 TTKP33981 857 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 APLNRP35414 380 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 GLRXP35754 106 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 HTR5AP47898 357 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 GDI2P50395 445 aaKnown RBP10.69□□□□□ -0.7
USP40-205ENST00000430158 HCCSP53701 268 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 UCP2P55851 309 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 ISL1P61371 349 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 TMED1Q13445 227 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 SWI5Q1ZZU3 235 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 TBC1D28Q2M2D7 210 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 TMEM255AQ5JRV8 349 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 ZNF691Q5VV52 312 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 FBXW10Q5XX13 1052 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 LAIR2Q6ISS4 152 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 ZNF544Q6NX49 715 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 C20orf204Q6ZNR8 217 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 RHOUQ7L0Q8 258 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 SHFQ7M4L6 423 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 SLC16A9Q7RTY1 509 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 GID4Q8IVV7 300 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 DHRSXQ8N5I4 330 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 OR6N2Q8NGY6 317 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 FBXW5Q969U6 566 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 ADI1Q9BV57 179 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 CDADC1Q9BWV3 514 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 YIPF3Q9GZM5 350 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 UBTD1Q9HAC8 227 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 WARS2Q9UGM6 360 aaKnown RBP10.69□□□□□ -0.7
USP40-205ENST00000430158 ST6GALNAC2Q9UJ37 374 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 COPS3Q9UNS2 423 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 POLR1DQ9Y2S0 133 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 ACANP16112 2415 aa10.69□□□□□ -0.7
USP40-205ENST00000430158 MED13LQ71F56 2210 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 SLC22A31A6NKX4 558 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 SMPD2O60906 423 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 SBK2P0C263 348 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 ACSM4P0C7M7 580 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 APOBEC3AP31941 199 aaPredicted RBP10.68□□□□□ -0.7
USP40-205ENST00000430158 CAPGP40121 348 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 OPRL1P41146 370 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 NAA10P41227 235 aaPredicted RBP10.68□□□□□ -0.7
USP40-205ENST00000430158 AQP4P55087 323 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 ERVS71-1P61550 626 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 RPS7P62081 194 aaKnown RBP10.68□□□□□ -0.7
USP40-205ENST00000430158 ECH1Q13011 328 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 SNTB2Q13425 540 aaKnown RBP10.68□□□□□ -0.7
USP40-205ENST00000430158 MAD2L1BPQ15013 274 aaPredicted RBP10.68□□□□□ -0.7
USP40-205ENST00000430158 LCN1P1Q5VSP4 162 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 MEDAGQ5VYS4 303 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 TTC23Q5W5X9 447 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 KRT80Q6KB66 452 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 TMEM154Q6P9G4 183 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 RFPL4BQ6ZWI9 263 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 PRSS45Q7RTY3 260 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 NAA40Q86UY6 237 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 DEPDC4Q8N2C3 294 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 RFLNBQ8N5W9 214 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 OR2AJ1Q8NGZ0 328 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 SLAMF6Q96DU3 332 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 C4orf45Q96LM5 186 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 DCLRE1CQ96SD1 692 aaKnown RBP10.68□□□□□ -0.7
USP40-205ENST00000430158 ATF6BQ99941 703 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 KCNS3Q9BQ31 491 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 TRAF4Q9BUZ4 470 aaPredicted RBP10.68□□□□□ -0.7
USP40-205ENST00000430158 POFUT1Q9H488 388 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 CDH20Q9HBT6 801 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 TBCCD1Q9NVR7 557 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 IMPAD1Q9NX62 359 aa10.68□□□□□ -0.7
USP40-205ENST00000430158 C5orf63A6NC05 138 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 MPZL2O60487 215 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 TMCC2O75069 709 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 FAM157BP0CG42 384 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 ZNF250P15622 560 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 PAX1P15863 534 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 ROM1Q03395 351 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 IL18R1Q13478 541 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 EIF2B1Q14232 305 aaKnown RBP10.67□□□□□ -0.7
USP40-205ENST00000430158 EFNB3Q15768 340 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 ZNF684Q5T5D7 378 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 ZNF555Q8NEP9 628 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 CYGBQ8WWM9 190 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 MBD6Q96DN6 1003 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 MARS2Q96GW9 593 aaKnown RBP10.67□□□□□ -0.7
USP40-205ENST00000430158 CNN2Q99439 309 aaKnown RBP10.67□□□□□ -0.7
USP40-205ENST00000430158 DOK1Q99704 481 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 C1QTNF5Q9BXJ0 243 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 PLK3Q9H4B4 646 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 MRPS18AQ9NVS2 196 aaKnown RBP10.67□□□□□ -0.7
USP40-205ENST00000430158 H2AFY2Q9P0M6 372 aaPredicted RBP10.67□□□□□ -0.7
USP40-205ENST00000430158 PLEKHA6Q9Y2H5 1048 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms