RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 CDKN2AP42771 156 aaKnown RBP8.43□□□□□ -1.06
GACAT3-201ENST00000426539 OMPP47874 163 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 GSK3BP49841 420 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 LSM6P62312 80 aaKnown RBP8.43□□□□□ -1.06
GACAT3-201ENST00000426539 PAX2Q02962 417 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 PAX8Q06710 450 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 SEC23BQ15437 767 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 KCNMB1Q16558 191 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 RSPO1Q2MKA7 263 aaPredicted RBP8.43□□□□□ -1.06
GACAT3-201ENST00000426539 C1orf94Q6P1W5 598 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 FKBP9P1Q75LS8 142 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 DOK3Q7L591 496 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 ARPINQ7Z6K5 226 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 TREML1Q86YW5 311 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 GLB1L2Q8IW92 636 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 OR5AS1Q8N127 324 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 KLHL36Q8N4N3 616 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 OR1F12Q8NHA8 337 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 SGMS2Q8NHU3 365 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 RP9Q8TA86 221 aaKnown RBP8.43□□□□□ -1.06
GACAT3-201ENST00000426539 ZNF420Q8TAQ5 688 aaPredicted RBP8.43□□□□□ -1.06
GACAT3-201ENST00000426539 PTP4A1Q93096 173 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 OR2V2Q96R30 315 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 GPA33Q99795 319 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 FUZQ9BT04 418 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 NUAK2Q9H093 628 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 ANKRD19PQ9H560 264 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 NTN4Q9HB63 628 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 GCM1Q9NP62 436 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 PTTG3PQ9NZH4 202 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 NDUFAF4Q9P032 175 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 IL19Q9UHD0 177 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 NUP50Q9UKX7 468 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 PPP1R3CQ9UQK1 317 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 AP3M1Q9Y2T2 418 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 PCDHGB1Q9Y5G3 927 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 IER3IP1Q9Y5U9 82 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 AUP1Q9Y679 476 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 WNK2Q9Y3S1 2297 aa8.43□□□□□ -1.06
GACAT3-201ENST00000426539 A0A1W2PRQ8 180 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 DNAJC9-AS1A6NH13 148 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 CEACAM18A8MTB9 384 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 DCTN6O00399 190 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 SOCS2O14508 198 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 GSTA4O15217 222 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 NDUFB2O95178 105 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 ZNF205O95201 554 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 TXNDC12O95881 172 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 RAC2P15153 192 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 TNFSF4P23510 183 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 PRTN3P24158 256 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 CD80P33681 288 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 MDH2P40926 338 aaKnown RBP8.42□□□□□ -1.06
GACAT3-201ENST00000426539 PMELP40967 661 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 HIST1H3AP68431 136 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 GUCY1A3Q02108 690 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 DGCR6Q14129 220 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 MEP1BQ16820 701 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 ARMCX4Q5H9R4 360 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 HIST2H3PS2Q5TEC6 136 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 GPR139Q6DWJ6 353 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 OR2T2Q6IF00 324 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 FBXW12Q6X9E4 464 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 HIST2H3AQ71DI3 136 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 FAM86B1Q8N7N1 296 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 ATG16L2Q8NAA4 619 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 OR10AD1Q8NGE0 317 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 TAF15Q92804 592 aaKnown RBP eCLIP8.42□□□□□ -1.06
GACAT3-201ENST00000426539 DACT3Q96B18 629 aaPredicted RBP8.42□□□□□ -1.06
GACAT3-201ENST00000426539 RSRC1Q96IZ7 334 aaKnown RBP8.42□□□□□ -1.06
GACAT3-201ENST00000426539 MEGF10Q96KG7 1140 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 TSSK2Q96PF2 358 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 ZNF747Q9BV97 191 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 RERGLQ9H628 205 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 TMEM165Q9HC07 324 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 DDX28Q9NUL7 540 aaKnown RBP8.42□□□□□ -1.06
GACAT3-201ENST00000426539 ARGLU1Q9NWB6 273 aaPredicted RBP8.42□□□□□ -1.06
GACAT3-201ENST00000426539 ZNF446Q9NWS9 450 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 TMEM5Q9Y2B1 443 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 LHFPL6Q9Y693 200 aa8.42□□□□□ -1.06
GACAT3-201ENST00000426539 IGHV3OR16-10A0A075B7F0 116 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 IGLV1-36A0A0B4J1U3 117 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 TRBV4-1A0A0J9YWV2 114 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 IGHV3-64DA0A0J9YX35 117 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 J3QW42 95 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 MLNRO43193 412 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 KCNAB3O43448 404 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 DIRAS1O95057 198 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 CYB5R3P00387 301 aaPredicted RBP8.41□□□□□ -1.06
GACAT3-201ENST00000426539 H1F0P07305 194 aaKnown RBP8.41□□□□□ -1.06
GACAT3-201ENST00000426539 IGHV4-38-2P0DP08 117 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 SNRPBP14678 240 aaKnown RBP8.41□□□□□ -1.06
GACAT3-201ENST00000426539 SELEP16581 610 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 KRTAP27-1Q3LI81 207 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 FAM201AQ5SY85 155 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 CORO6Q6QEF8 472 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 HACD2Q6Y1H2 254 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 DPY19L2P2Q6ZN68 376 aa8.41□□□□□ -1.06
GACAT3-201ENST00000426539 COLCA1Q6ZS62 124 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms