RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 C12orf49Q9H741 205 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 ABCB10Q9NRK6 738 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF629Q9UEG4 869 aaPredicted RBP13.77□□□□□ -0.21
SHOX2-202ENST00000425436 MRM2Q9UI43 246 aaKnown RBP13.77□□□□□ -0.21
SHOX2-202ENST00000425436 IKZF2Q9UKS7 526 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 GRIP1Q9Y3R0 1128 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 NKX2-6A6NCS4 301 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 TMEM212A6NML5 194 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 TBX1O43435 398 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 PFDN1O60925 122 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 SS18L1O75177 396 aaPredicted RBP13.76□□□□□ -0.21
SHOX2-202ENST00000425436 UPK3AO75631 287 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 ABHD16AO95870 558 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 HLA-DOBP13765 273 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 CTLA4P16410 223 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 AGTR1P30556 359 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 NTF4P34130 210 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 OPRM1P35372 400 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 CCR9P51686 369 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 IFITM3Q01628 133 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 MELKQ14680 651 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 DEGS2Q6QHC5 323 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.76□□□□□ -0.21
SHOX2-202ENST00000425436 LAX1Q8IWV1 398 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF808Q8N4W9 903 aaPredicted RBP13.76□□□□□ -0.21
SHOX2-202ENST00000425436 RELL2Q8NC24 303 aaPredicted RBP13.76□□□□□ -0.21
SHOX2-202ENST00000425436 OR6X1Q8NH79 312 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 OR5AK2Q8NH90 309 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 ASB5Q8WWX0 329 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 NSMAFQ92636 917 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 OR8B4Q96RC9 309 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 SFXN3Q9BWM7 321 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 GLRX2Q9NS18 164 aa13.76□□□□□ -0.21
SHOX2-202ENST00000425436 SPTBN1Q01082 2364 aaKnown RBP13.76□□□□□ -0.21
SHOX2-202ENST00000425436 DVL2O14641 736 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF254O75437 659 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 PTTG1O95997 202 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 IGHG1P01857 330 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 APOA1P02647 267 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 RAF1P04049 648 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF43P17038 809 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 RAB3BP20337 219 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 ADAM8P78325 824 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 INSL4Q14641 139 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 PCK2Q16822 640 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 HSD17B12Q53GQ0 312 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 LYPD4Q6UWN0 246 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 FAM131AQ6UXB0 335 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 NHLRC1Q6VVB1 395 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 LUZP2Q86TE4 346 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 OR9K2Q8NGE7 335 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 SLC25A44Q96H78 314 aaPredicted RBP13.75□□□□□ -0.21
SHOX2-202ENST00000425436 MRI1Q9BV20 369 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 SLITRK2Q9H156 845 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 ZCCHC4Q9H5U6 513 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 BCO1Q9HAY6 547 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 COMMD3Q9UBI1 195 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 EMC9Q9Y3B6 208 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 FREM1Q5H8C1 2179 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 LRRK2Q5S007 2527 aa13.75□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF726A6NNF4 738 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 NOTOA8MTQ0 251 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 EEF1E1-BLOC1S5C9J1V9 151 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 MAGEB4O15481 346 aaPredicted RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 EEF1E1O43324 174 aaKnown RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 CLDN14O95500 239 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 IL18BPO95998 194 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 CRHP06850 196 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 OR8G3PP0DMU2 310 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 PSMB10P40306 273 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 PSMD7P51665 324 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 BIDP55957 195 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 RPS11P62280 158 aaKnown RBP eCLIP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 STEAP3Q658P3 488 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 GLB1L2Q8IW92 636 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 ZIC4Q8N9L1 334 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF610Q8N9Z0 462 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 CMTM3Q96MX0 182 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF385AQ96PM9 386 aaKnown RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 MRPL13Q9BYD1 178 aaKnown RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 TTTY10Q9BZA0 68 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 OPN3Q9H1Y3 402 aaPredicted RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 MIXL1Q9H2W2 232 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 ABRACLQ9P1F3 81 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 B3GAT1Q9P2W7 334 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 KCNG2Q9UJ96 466 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 COA3Q9Y2R0 106 aaPredicted RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 FLVCR1Q9Y5Y0 555 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 V9GYH0 126 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 IGKV3D-15A0A087WSY6 115 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 SHISA3A0PJX4 238 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 A1L4Q6 167 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF724A8MTY0 619 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 ZFPL1O95159 310 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 CGAP01215 116 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 SPARCP09486 303 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 AGAP20933 346 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 APEX1P27695 318 aaKnown RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 EVX1P49640 407 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms