RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	DLGAP1	O14490	977 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	ICMT	O60725	284 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	CLPTM1	O96005	669 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	IFNG	P01579	166 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	HMGN1	P05114	100 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	COX5B	P10606	129 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	WNT5A	P41221	380 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	ERVS71-1	P61550	626 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	LSM6	P62312	80 aa	Known RBP	14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	SCRN3	Q0VDG4	424 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	MAD2L1BP	Q15013	274 aa	Predicted RBP	14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	NKPD1	Q17RQ9	610 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	C6orf52	Q5T4I8	152 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	SLX4IP	Q5VYV7	408 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	C12orf73	Q69YU5	71 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	CYB5R2	Q6BCY4	276 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	ZNF774	Q6NX45	483 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	UGT2A3	Q6UWM9	527 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	GLB1L2	Q8IW92	636 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	OR9Q1	Q8NGQ5	310 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	SNX18	Q96RF0	628 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	MED20	Q9H944	212 aa		14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	NDRG4	Q9ULP0	352 aa	Known RBP	14.02	□□□□□ -0.16
DDR1-231	ENST00000417521	ABCA1	O95477	2261 aa		14.02	□□□□□ -0.17
DDR1-231	ENST00000417521	ANK3	Q12955	4377 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	IGLV1-36	A0A0B4J1U3	117 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	IGHV4-61	A0A0C4DH41	118 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	GPANK1	O95872	356 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	IGHV3-13	P01766	116 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	GYPB	P06028	91 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	IGHV4-31	P0DP07	118 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	CLU	P10909	449 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	ZNF3	P17036	446 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	CRABP1	P29762	137 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	PYCR1	P32322	319 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	GZMK	P49863	264 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	RIN1	Q13671	783 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	SNAPC1	Q16533	368 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	OTP	Q5XKR4	325 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	ZNF101	Q8IZC7	436 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	PACRGL	Q8N7B6	248 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	ZNRF4	Q8WWF5	429 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	OTULIN	Q96BN8	352 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	PLEKHA8	Q96JA3	519 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	HCAR1	Q9BXC0	346 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	TEX12	Q9BXU0	123 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	EMC7	Q9NPA0	242 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	HINT3	Q9NQE9	182 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	SMPD3	Q9NY59	655 aa	Predicted RBP	14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	B9D1	Q9UPM9	204 aa		14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	COA3	Q9Y2R0	106 aa	Predicted RBP	14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	SON	P18583	2426 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-231	ENST00000417521	C17orf100	A8MU93	164 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	PRKY	O43930	277 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	MPZL1	O95297	269 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	HPX	P02790	462 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	TACSTD2	P09758	323 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	GCH1	P30793	250 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	CENPA	P49450	140 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	MRPS11	P82912	194 aa	Known RBP	14	□□□□□ -0.17
DDR1-231	ENST00000417521	AQP6	Q13520	282 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	ZNF718	Q3SXZ3	478 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	ELFN2	Q5R3F8	820 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	PLBD1	Q6P4A8	553 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	DNM1P34	Q6PK57	102 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	ARL9	Q6T311	187 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	ZBTB46	Q86UZ6	589 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	OR51L1	Q8NGJ5	315 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	SNX33	Q8WV41	574 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	RDH5	Q92781	318 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	PTP4A1	Q93096	173 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	MARS2	Q96GW9	593 aa	Known RBP	14	□□□□□ -0.17
DDR1-231	ENST00000417521	NMNAT2	Q9BZQ4	307 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	ELOVL3	Q9HB03	270 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521	NKIRAS2	Q9NYR9	191 aa		14	□□□□□ -0.17
DDR1-231	ENST00000417521		E9PQ18	207 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	SGCE	O43556	437 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	NAT2	P11245	290 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	KCNMB1	Q16558	191 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	PCGF3	Q3KNV8	242 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	MBNL2	Q5VZF2	373 aa	Known RBP	13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	TMEM154	Q6P9G4	183 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	CPO	Q8IVL8	374 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	OR2T4	Q8NH00	348 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	C4orf45	Q96LM5	186 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	CHODL	Q9H9P2	273 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	C8orf4	Q9NR00	106 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	TMEM160	Q9NX00	188 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	PRR23D1	E9PI22	279 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	LYNX1	G3V0Z9	82 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521		H3BSA7	217 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	LILRA1	O75019	489 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	MT-ND5	P03915	603 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	LYNX1	P0DP58	116 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	SPI1	P17947	270 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	ACHE	P22303	614 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	TUBG1	P23258	451 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	SLC25A1	P53007	311 aa		13.99	□□□□□ -0.17
DDR1-231	ENST00000417521	TMEM33	P57088	247 aa		13.99	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms