RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 RAB6AP20340 208 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 CHATP28329 748 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 PRSS3P35030 304 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 MAS1LP35410 378 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 ST3GAL3Q11203 375 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 DCAF10Q5QP82 559 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 LY6G6FQ5SQ64 297 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 PRPF38BQ5VTL8 546 aaKnown RBP7.09□□□□□ -1.27
SIK3-203ENST00000415541 STEAP1BQ6NZ63 245 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 FAM199XQ6PEV8 388 aaPredicted RBP7.09□□□□□ -1.27
SIK3-203ENST00000415541 DCXRQ7Z4W1 244 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 THNSL2Q86YJ6 484 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 RBM45Q8IUH3 476 aaKnown RBP7.09□□□□□ -1.27
SIK3-203ENST00000415541 HIST3H2BBQ8N257 126 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 TMEM99Q8N816 258 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 ROBO4Q8WZ75 1007 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 IP6K3Q96PC2 410 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 C1orf198Q9H425 327 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 PARP11Q9NR21 331 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 PNO1Q9NRX1 252 aaKnown RBP7.09□□□□□ -1.27
SIK3-203ENST00000415541 A0A1B0GTI1 187 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 A0A1W2PPE2 198 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 P2RX6O15547 441 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 LAMTOR5O43504 91 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 GLSO94925 669 aaPredicted RBP7.09□□□□□ -1.27
SIK3-203ENST00000415541 IL9P15248 144 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 SRMP19623 302 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 HSD11B2P80365 405 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 JOSD1Q15040 202 aaPredicted RBP7.09□□□□□ -1.27
SIK3-203ENST00000415541 ZNF750Q32MQ0 723 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 DMRTA1Q5VZB9 504 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 DMKNQ6E0U4 476 aaPredicted RBP7.09□□□□□ -1.27
SIK3-203ENST00000415541 FAM122AQ96E09 287 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 DERL3Q96Q80 235 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 ZFYVE21Q9BQ24 234 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 ZNF649Q9BS31 505 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 ACTRT3Q9BYD9 372 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 SMOC1Q9H4F8 434 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 PRDM7Q9NQW5 492 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 P2RX2Q9UBL9 471 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 SIT1Q9Y3P8 196 aa7.09□□□□□ -1.27
SIK3-203ENST00000415541 CHTOPQ9Y3Y2 248 aaKnown RBP7.09□□□□□ -1.27
SIK3-203ENST00000415541 TPRP12270 2363 aaKnown RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 EEF1E1-BLOC1S5C9J1V9 151 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 M0R3H8 397 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 TAAR5O14804 337 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 EREGO14944 169 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 XRCC3O43542 346 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 SOX15O60248 233 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 GPRIN2O60269 458 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 PRAMEF4O60810 478 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 LDB3O75112 727 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 PAPLNO95428 1278 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 AIFM1O95831 613 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 RAC2P15153 192 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 PAX1P15863 534 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 HIST1H1TP22492 207 aaPredicted RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 ITPKBP27987 946 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 KHKP50053 298 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 RPS15AP62244 130 aaKnown RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 HGFACQ04756 655 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 ISXQ2M1V0 245 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 PHF19Q5T6S3 580 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 PRAMEF9Q5VWM5 478 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 SYT9Q86SS6 491 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 BBS1Q8NFJ9 593 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 OR8S1Q8NH09 359 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 SLC41A3Q96GZ6 507 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 HINT3Q9NQE9 182 aaKnown RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 IL20RAQ9UHF4 553 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 PCYT1BQ9Y5K3 369 aaPredicted RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 COL4A6Q14031 1691 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 PLPP1O14494 284 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 SMAD9O15198 467 aaKnown RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 DNAJB6O75190 326 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 NSA2O95478 260 aaKnown RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 TXNDC12O95881 172 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 GABRR1P24046 479 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 EDNRAP25101 427 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 CARD18P57730 90 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 YPEL5P62699 121 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 ACTA2P62736 377 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 ACTG2P63267 376 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 SYPL1Q16563 259 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 HAGHQ16775 308 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 MST1LQ2TV78 715 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 OLIG3Q7RTU3 272 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 APOBEC4Q8WW27 367 aaKnown RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 FAM46AQ96IP4 442 aaKnown RBP7.08□□□□□ -1.28
SIK3-203ENST00000415541 MRGPRX4Q96LA9 322 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 FBXO7Q9Y3I1 522 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 CSAG2Q9Y5P2 127 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 NOTCH4Q99466 2003 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 SCN3AQ9NY46 2000 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 TRBV2A0A0J9YWF9 115 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 C13orf42A0A1B0GVH6 325 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 A0A1W2PQF6 199 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 IFITM10A6NMD0 228 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 PRSS47A8MTI9 375 aa7.08□□□□□ -1.28
SIK3-203ENST00000415541 CLEC3AO75596 197 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms