RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 DUSP19Q8WTR2 217 aa11.69□□□□□ -0.54
LITAF-203ENST00000413364 RHOVQ96L33 236 aa11.69□□□□□ -0.54
LITAF-203ENST00000413364 CACNG6Q9BXT2 260 aa11.69□□□□□ -0.54
LITAF-203ENST00000413364 OPN3Q9H1Y3 402 aaPredicted RBP11.69□□□□□ -0.54
LITAF-203ENST00000413364 BARX1Q9HBU1 254 aaPredicted RBP11.69□□□□□ -0.54
LITAF-203ENST00000413364 TAS2R10Q9NYW0 307 aa11.69□□□□□ -0.54
LITAF-203ENST00000413364 TMED7Q9Y3B3 224 aa11.69□□□□□ -0.54
LITAF-203ENST00000413364 PCDHGA5Q9Y5G8 931 aa11.69□□□□□ -0.54
LITAF-203ENST00000413364 PCDHGA1Q9Y5H4 931 aa11.69□□□□□ -0.54
LITAF-203ENST00000413364 MPDZO75970 2070 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 TSTD3H0UI37 97 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 MAGEB4O15481 346 aaPredicted RBP11.68□□□□□ -0.54
LITAF-203ENST00000413364 NPIPB7O75200 414 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 MED6O75586 246 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 WISP1O95388 367 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 CD1AP06126 327 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 SYPP08247 313 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 NR2C1P13056 603 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 AGAP20933 346 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 SHC1P29353 583 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 CEACAM6P40199 344 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 PMELP40967 661 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 PKIAP61925 76 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 SIRPAP78324 504 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 CDK5R1Q15078 307 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 ACSM3Q53FZ2 586 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 LYPD4Q6UWN0 246 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 MOB3CQ70IA8 216 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 GRINAQ7Z429 371 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 CPEB2Q7Z5Q1 589 aaKnown RBP11.68□□□□□ -0.54
LITAF-203ENST00000413364 TPRA1Q86W33 373 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 NR2C2APQ86WQ0 139 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 TEX19Q8NA77 164 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 BEST4Q8NFU0 473 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 SMIM19Q96E16 107 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 SPSB2Q99619 263 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 SLC26A1Q9H2B4 701 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 APMAPQ9HDC9 416 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 RXFP3Q9NSD7 469 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 OCIAD1Q9NX40 245 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 RASL12Q9NYN1 266 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 GNG8Q9UK08 70 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 KCNIP3Q9Y2W7 256 aa11.68□□□□□ -0.54
LITAF-203ENST00000413364 TRBV11-1A0A0K0K1C0 115 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 TMEM72A0PK05 275 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 TMEM200CA6NKL6 621 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 COLCA2A8K830 154 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 A8MVM7 634 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 FAM171A2A8MVW0 826 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 PATE3B3GLJ2 98 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 ZNF354AO60765 605 aaPredicted RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 CER1O95813 267 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 UBBP0CG47 229 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 UBCP0CG48 685 aaKnown RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 FGF5P12034 268 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 CPN1P15169 458 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 FBXW4P57775 412 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 RPS27AP62979 156 aaKnown RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 UBA52P62987 128 aaKnown RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 MESTQ5EB52 335 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 FAM27D1Q5T7N8 215 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 HBMQ6B0K9 141 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 LCN10Q6JVE6 187 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 RPL22L1Q6P5R6 122 aaKnown RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 SLC16A9Q7RTY1 509 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 C1orf210Q8IVY1 113 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 ZNF383Q8NA42 475 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 THAP3Q8WTV1 239 aaPredicted RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 THAP4Q8WY91 577 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 SLC25A36Q96CQ1 311 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 RAB3CQ96E17 227 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 TSSK2Q96PF2 358 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 TAS2R5Q9NYW4 299 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 ZNF629Q9UEG4 869 aaPredicted RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 KHDRBS3O75525 346 aaKnown RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 RENP00797 406 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 CYC1P08574 325 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 RBMS1P29558 406 aaKnown RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 SGCBQ16585 318 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 TMEM255AQ5JRV8 349 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 FAM69AQ5T7M9 428 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 C1orf140Q5VVS0 124 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 SLC22A10Q63ZE4 541 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 TMEM205Q6UW68 189 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 ZNF227Q86WZ6 799 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 OR5L2Q8NGL0 311 aa11.67□□□□□ -0.54
LITAF-203ENST00000413364 NPDC1Q9NQX5 325 aaPredicted RBP11.67□□□□□ -0.54
LITAF-203ENST00000413364 ASCC3Q8N3C0 2202 aaKnown RBP11.66□□□□□ -0.54
LITAF-203ENST00000413364 ANKUB1A6NFN9 424 aa11.66□□□□□ -0.54
LITAF-203ENST00000413364 AP4M1O00189 453 aa11.66□□□□□ -0.54
LITAF-203ENST00000413364 GIFP27352 417 aa11.66□□□□□ -0.54
LITAF-203ENST00000413364 G0S2P27469 103 aa11.66□□□□□ -0.54
LITAF-203ENST00000413364 GNG10P50151 68 aa11.66□□□□□ -0.54
LITAF-203ENST00000413364 DUSP3P51452 185 aaPredicted RBP11.66□□□□□ -0.54
LITAF-203ENST00000413364 SUMO3P55854 103 aaPredicted RBP11.66□□□□□ -0.54
LITAF-203ENST00000413364 NHLH2Q02577 135 aa11.66□□□□□ -0.54
LITAF-203ENST00000413364 IL11RAQ14626 422 aa11.66□□□□□ -0.54
LITAF-203ENST00000413364 AKIRIN2Q53H80 203 aa11.66□□□□□ -0.54
LITAF-203ENST00000413364 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms