RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 IL34Q6ZMJ4 242 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 Q6ZSR6 202 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 ZNF761Q86XN6 746 aaPredicted RBP15.79■□□□□ 0.12
SDCBP-202ENST00000413219 BOLLQ8N9W6 283 aaKnown RBP15.79■□□□□ 0.12
SDCBP-202ENST00000413219 OR4D6Q8NGJ1 314 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 IFT22Q9H7X7 185 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 MMP26Q9NRE1 261 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 EMC9Q9Y3B6 208 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 HS3ST3A1Q9Y663 406 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 CACNA1IQ9P0X4 2223 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 KLF8O95600 359 aaPredicted RBP15.78■□□□□ 0.12
SDCBP-202ENST00000413219 ACTL6AO96019 429 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 PLGP00747 810 aaPredicted RBP15.78■□□□□ 0.12
SDCBP-202ENST00000413219 PGAM2P15259 253 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 HSD11B1P28845 292 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 HHEXQ03014 270 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 TMEM88Q6PEY1 159 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 DRAM2Q6UX65 266 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 RHOUQ7L0Q8 258 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 PAQR4Q8N4S7 273 aaPredicted RBP15.78■□□□□ 0.12
SDCBP-202ENST00000413219 SEC11CQ9BY50 192 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 CSAG2Q9Y5P2 127 aa15.78■□□□□ 0.12
SDCBP-202ENST00000413219 A0A1W2PQD3 144 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 EEF1E1-BLOC1S5C9J1V9 151 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 HCRTR2O43614 444 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 BPNT1O95861 308 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 GP1BBP13224 206 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 PGCP20142 388 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 STK11Q15831 433 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 DEGS2Q6QHC5 323 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 MDGA2Q7Z553 956 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 OR1M1Q8NGA1 313 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 PAQR8Q8TEZ7 354 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 PTPMT1Q8WUK0 201 aaPredicted RBP15.77■□□□□ 0.12
SDCBP-202ENST00000413219 DCUN1D4Q92564 292 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 SLC25A36Q96CQ1 311 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 ZNF285Q96NJ3 590 aa15.77■□□□□ 0.12
SDCBP-202ENST00000413219 ICOSLGO75144 302 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 NPIPB7O75200 414 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 HEXAP06865 529 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 VAMP1P23763 118 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 AIMP2Q13155 320 aaKnown RBP15.77■□□□□ 0.11
SDCBP-202ENST00000413219 ZNF528Q3MIS6 628 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 H3F3CQ6NXT2 135 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 TMEM71Q6P5X7 295 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 KCTD9Q7L273 389 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 CASTOR1Q8WTX7 329 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 MMABQ96EY8 250 aaPredicted RBP15.77■□□□□ 0.11
SDCBP-202ENST00000413219 TCTN2Q96GX1 697 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 ADOQ96SZ5 270 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 TCEAL2Q9H3H9 227 aaPredicted RBP15.77■□□□□ 0.11
SDCBP-202ENST00000413219 CYTL1Q9NRR1 136 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 DZANK1Q9NVP4 752 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 COA4Q9NYJ1 87 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 MYEF2Q9P2K5 600 aaKnown RBP15.77■□□□□ 0.11
SDCBP-202ENST00000413219 FBLN5Q9UBX5 448 aa15.77■□□□□ 0.11
SDCBP-202ENST00000413219 LAMA2P24043 3122 aaKnown RBP15.76■□□□□ 0.11
SDCBP-202ENST00000413219 C5orf51A6NDU8 294 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 IFNA6P05013 189 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 HRH1P35367 487 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 RPL35P42766 123 aaKnown RBP15.76■□□□□ 0.11
SDCBP-202ENST00000413219 RABIFP47224 123 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 AKR1D1P51857 326 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 QRFPP83859 136 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 TOMM34Q15785 309 aaPredicted RBP15.76■□□□□ 0.11
SDCBP-202ENST00000413219 NKAPLQ5M9Q1 402 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 AWAT2Q6E213 333 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 HOGA1Q86XE5 327 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 CBLN2Q8IUK8 224 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 GVQW1Q8N7I0 195 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 CHST4Q8NCG5 386 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 ADAD2Q8NCV1 583 aaKnown RBP15.76■□□□□ 0.11
SDCBP-202ENST00000413219 C12orf57Q99622 126 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 UQCC2Q9BRT2 126 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 CNTD2Q9H8S5 307 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 ZFP57Q9NU63 452 aa15.76■□□□□ 0.11
SDCBP-202ENST00000413219 LOC100509620A0A075B734 347 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 PLPP3O14495 311 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 LYL1P12980 280 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 SERPINF1P36955 418 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 SLC6A9P48067 706 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 POLR2HP52434 150 aaKnown RBP15.75■□□□□ 0.11
SDCBP-202ENST00000413219 AKR1C2P52895 323 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 PNLIPRP2P54317 469 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 AKR1C1Q04828 323 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 PCK2Q16822 640 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 OR52W1Q6IF63 320 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 POMZP3Q6PJE2 187 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 PARGQ86W56 976 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 ZNF321PQ8N8H1 164 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 OR13H1Q8NG92 308 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 BADQ92934 168 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 NKD1Q969G9 470 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 ADIPOR1Q96A54 375 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 MRGPRX1Q96LB2 322 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 RNF126Q9BV68 326 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 RTN4RQ9BZR6 473 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 TLNRD1Q9H1K6 362 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 COA3Q9Y2R0 106 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms