RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 STARD10Q9Y365 291 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 IGHV7-4-1A0A0J9YVY3 117 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 NDUFC2-KCTD14E9PQ53 114 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 CDC40O60508 579 aaKnown RBP eCLIP1.77□□□□□ -2.13
PMS1-203ENST00000409593 SEMA3DO95025 777 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 NDUFB10O96000 172 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 GLAP06280 429 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 TNNI1P19237 187 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 ZNF726P1Q15940 193 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 Q6ZSR3 168 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 PPP1R42Q7Z4L9 355 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 TMEM150AQ86TG1 271 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 ZCCHC7Q8N3Z6 543 aaKnown RBP1.77□□□□□ -2.13
PMS1-203ENST00000409593 GPATCH11Q8N954 259 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 ZCCHC13Q8WW36 166 aaKnown RBP1.77□□□□□ -2.13
PMS1-203ENST00000409593 WDR34Q96EX3 536 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 DNAJC1Q96KC8 554 aaKnown RBP1.77□□□□□ -2.13
PMS1-203ENST00000409593 IP6K3Q96PC2 410 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 SLC29A1Q99808 456 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 SIGLEC7Q9Y286 467 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 DENND4AQ7Z401 1863 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 NLRC5Q86WI3 1866 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 A0A1W2PNN7 141 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 RAB29O14966 203 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 KLHL41O60662 606 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 EIF1BO60739 113 aaKnown RBP1.76□□□□□ -2.13
PMS1-203ENST00000409593 FKBP6O75344 327 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 PALMO75781 387 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 ANXA5P08758 320 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 ZNF43P17038 809 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 NCF2P19878 526 aaPredicted RBP1.76□□□□□ -2.13
PMS1-203ENST00000409593 EIF1P41567 113 aaKnown RBP1.76□□□□□ -2.13
PMS1-203ENST00000409593 PRLHRP49683 370 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 TMED10P49755 219 aaKnown RBP1.76□□□□□ -2.13
PMS1-203ENST00000409593 RPL23AP62750 156 aaKnown RBP1.76□□□□□ -2.13
PMS1-203ENST00000409593 RPL23P62829 140 aaKnown RBP1.76□□□□□ -2.13
PMS1-203ENST00000409593 TEX30Q5JUR7 227 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 MBOAT1Q6ZNC8 495 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 ZNF101Q8IZC7 436 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 UBE2J2Q8N2K1 259 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 CHST4Q8NCG5 386 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 KLF14Q8TD94 323 aaPredicted RBP1.76□□□□□ -2.13
PMS1-203ENST00000409593 TMEM230Q96A57 120 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 DUS3LQ96G46 650 aaKnown RBP1.76□□□□□ -2.13
PMS1-203ENST00000409593 ZBTB18Q99592 522 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 PALLDQ8WX93 1383 aa1.76□□□□□ -2.13
PMS1-203ENST00000409593 IGHV3-49A0A0A0MS15 119 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 OR5H1A6NKK0 313 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 KRBOX1C9JBD0 128 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 H7C417 338 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 TSPAN13O95857 204 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 IGHV3-11P01762 117 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 U2AF2P26368 475 aaKnown RBP eCLIP1.75□□□□□ -2.132e-7■■■■□ 23.3
PMS1-203ENST00000409593 PSMB5P28074 263 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 FOXN2P32314 431 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 ACTR1AP61163 376 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 BST1Q10588 318 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 RBMY1FQ15415 496 aaKnown RBP1.75□□□□□ -2.13
PMS1-203ENST00000409593 PRAMEF5Q5TYX0 476 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 FAM222AQ5U5X8 452 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 PRAMEF6Q5VXH4 476 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 GUSBP11Q6P575 273 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 MRPL55Q7Z7F7 128 aaKnown RBP1.75□□□□□ -2.13
PMS1-203ENST00000409593 CSGALNACT2Q8N6G5 542 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 PRELID2Q8N945 189 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 OR11H7Q8NGC8 314 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 KIFAP3Q92845 792 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 GCOM2Q9BZD3 368 aaPredicted RBP1.75□□□□□ -2.13
PMS1-203ENST00000409593 ZSCAN16Q9H4T2 348 aaPredicted RBP1.75□□□□□ -2.13
PMS1-203ENST00000409593 HYPKQ9NX55 129 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 MTFP1Q9UDX5 166 aa1.75□□□□□ -2.13
PMS1-203ENST00000409593 EIF4E2O60573 245 aaKnown RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 PAHP00439 452 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 CST1P01037 141 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 IGLV6-57P01721 117 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 NAA10P41227 235 aaPredicted RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 CDH6P55285 790 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 PRR3P79522 188 aaKnown RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 CYP24A1Q07973 514 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 YIF1BQ5BJH7 314 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 PPM1LQ5SGD2 360 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 CENPPQ6IPU0 288 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 RNASEKQ6P5S7 137 aaKnown RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 CASC1Q6TDU7 716 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 TMEM136Q6ZRR5 245 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 RGS9BPQ6ZS82 235 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 ZNF664Q8N3J9 261 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 OR5T1Q8NG75 326 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 EEF1AKMT3Q96AZ1 226 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 ZNF317Q96PQ6 595 aaPredicted RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 HRASLS2Q9NWW9 162 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 UXTQ9UBK9 157 aaPredicted RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 TSPOAP1O95153 1857 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 SCN4AP35499 1836 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 IGHV1-3A0A0C4DH29 117 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 SMCO2A6NFE2 343 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 C17orf51A8MQB3 221 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 LYRM9A8MSI8 78 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 CEACAM18A8MTB9 384 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms