RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 NUDCD2Q8WVJ2 157 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 KLHDC7BQ96G42 594 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 FAHD2AQ96GK7 314 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 SEC61A2Q9H9S3 476 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 LYRM4Q9HD34 91 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 GPR27Q9NS67 375 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 A0A0A6YYH2 397 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 A6NJ64 397 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 EFCAB7A8K855 629 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 H7C1C5 153 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 DOK2O60496 412 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 FAM157CP0CG43 387 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 HAAOP46952 286 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 LCN6P62502 163 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 MGAT2Q10469 447 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 RBM39Q14498 530 aaKnown RBP13.88□□□□□ -0.19
LIMS2-205ENST00000409455 C5orf46Q6UWT4 87 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 PAQR4Q8N4S7 273 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-205ENST00000409455 C14orf79Q96F83 325 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 INTS14Q96SY0 518 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 CDC6Q99741 560 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 SYT4Q9H2B2 425 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 GRHPRQ9UBQ7 328 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 DHDHQ9UQ10 334 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 HIF3AQ9Y2N7 669 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 TMED7Q9Y3B3 224 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 TMEM235A6NFC5 223 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 STK17BO94768 372 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 ARRB1P49407 418 aaPredicted RBP13.87□□□□□ -0.19
LIMS2-205ENST00000409455 PPT1P50897 306 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 PSG6Q00889 435 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 GPR18Q14330 331 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 TMEM225Q6GV28 225 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 FBXO42Q6P3S6 717 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 TAF8Q7Z7C8 310 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 RCBTB1Q8NDN9 531 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 TMEM52Q8NDY8 209 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 OR4N2Q8NGD1 307 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 MIOXQ9UGB7 285 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 TRBV6-7A0A0A0MS04 114 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 METTL12A8MUP2 240 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 DUS4LO95620 317 aaKnown RBP13.87□□□□□ -0.19
LIMS2-205ENST00000409455 CSTAP01040 98 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 IGKV1D-16P01601 117 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 F13BP05160 661 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 CD2P06729 351 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 CTSEP14091 401 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 AKR1C4P17516 323 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 MAOAP21397 527 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 CYCSP99999 105 aaKnown RBP13.87□□□□□ -0.19
LIMS2-205ENST00000409455 MST1LQ2TV78 715 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 LRRC69Q6ZNQ3 347 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 PHOSPHO1Q8TCT1 267 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 C3orf49Q96BT1 292 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 CTHRC1Q96CG8 243 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 TM4SF19Q96DZ7 209 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 OR2A5Q96R48 311 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 MICU1Q9BPX6 476 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 NMES1Q9C002 83 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 CYTL1Q9NRR1 136 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 WIF1Q9Y5W5 379 aa13.87□□□□□ -0.19
LIMS2-205ENST00000409455 TO15178 435 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 SERPINF1P36955 418 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 FAM76BQ5HYJ3 339 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 AWAT2Q6E213 333 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 OR10K2Q6IF99 312 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF585AQ6P3V2 769 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 SAT2Q96F10 170 aaPredicted RBP13.86□□□□□ -0.19
LIMS2-205ENST00000409455 EGLN1Q9GZT9 426 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 SEBOXQ9HB31 216 aaPredicted RBP13.86□□□□□ -0.19
LIMS2-205ENST00000409455 FITM1A5D6W6 292 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 RNASEK-C17orf49H0YIS7 233 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 OR10H2O60403 315 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 RENP00797 406 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 ERCC1P07992 297 aaPredicted RBP13.86□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF44P15621 663 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 CX3CR1P49238 355 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF141Q15928 474 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 AKIRIN2Q53H80 203 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 SPEM1Q8N4L4 309 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 CMKLR1Q99788 373 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 ELOVL3Q9HB03 270 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 KCNG2Q9UJ96 466 aa13.86□□□□□ -0.19
LIMS2-205ENST00000409455 CACNA1CQ13936 2221 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 FANCMQ8IYD8 2048 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 GATCO43716 136 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 IFI6P09912 130 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 CPT2P23786 658 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 MPZP25189 248 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 CD27P26842 260 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 F2RL1P55085 397 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 ELAVL1Q15717 326 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF74Q16587 644 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 MOGAT2Q3SYC2 334 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 RNF212Q495C1 297 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 PHF19Q5T6S3 580 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 ASPHD2Q6ICH7 369 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 FDX2Q6P4F2 183 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 CORO6Q6QEF8 472 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 TMPRSS9Q7Z410 1059 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms