RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SEC14L2O76054 403 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 IGKV3-15P01624 115 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 CRYAAP02489 173 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 CSF3P09919 207 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 PGA4P0DJD7 388 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 PGA3P0DJD8 388 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 LYNX1P0DP58 116 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 DBTP11182 482 aaKnown RBP8.91□□□□□ -0.98
NEDD8-202ENST00000396828 PIPP12273 146 aaPredicted RBP8.91□□□□□ -0.98
NEDD8-202ENST00000396828 BMP4P12644 408 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SPI1P17947 270 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 THBS4P35443 961 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 GZMKP49863 264 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SNRPD2P62316 118 aaKnown RBP8.91□□□□□ -0.98
NEDD8-202ENST00000396828 LCN6P62502 163 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 ARF1P84077 181 aaKnown RBP8.91□□□□□ -0.98
NEDD8-202ENST00000396828 ROR2Q01974 943 aaKnown RBP8.91□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF91Q05481 1191 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 RAB40BQ12829 278 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 POU4F2Q12837 409 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 CAMK2DQ13557 499 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 MSMPQ1L6U9 139 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 CARD17Q5XLA6 110 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 FAM166AQ6J272 317 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 NHLRC1Q6VVB1 395 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 AHSA2Q719I0 299 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 STX19Q8N4C7 294 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SYT14Q8NB59 555 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 NOXO1Q8NFA2 376 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 PROKR2Q8NFJ6 384 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 BBS1Q8NFJ9 593 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 TSPAN14Q8NG11 270 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 OR9Q1Q8NGQ5 310 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 OR6K6Q8NGW6 343 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 OR6N1Q8NGY5 312 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 GGHQ92820 318 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 RNFT2Q96EX2 444 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 C1orf159Q96HA4 380 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 DDOQ99489 341 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 TEAD3Q99594 435 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 DOK1Q99704 481 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 PIMREGQ9BSJ6 248 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 COPS4Q9BT78 406 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 HCAR1Q9BXC0 346 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 NMNAT2Q9BZQ4 307 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SYT4Q9H2B2 425 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 PLK3Q9H4B4 646 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 RERGLQ9H628 205 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 NOX3Q9HBY0 568 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SRA1Q9HD15 236 aaKnown RBP8.91□□□□□ -0.98
NEDD8-202ENST00000396828 AMBNQ9NP70 447 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 LPAR3Q9UBY5 353 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 PSORS1C1Q9UIG5 152 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SCOCQ9UIL1 159 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 PCDHGB1Q9Y5G3 927 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SNX5Q9Y5X3 404 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 FKBP7Q9Y680 259 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 A0A087WXM4 84 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 LOC390937A0A1W2PQ73 354 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 B9A039 149 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 NDUFS8O00217 210 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 SLC16A7O60669 478 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 LILRA1O75019 489 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 GLCEO94923 617 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 FADS2O95864 444 aaKnown RBP8.9□□□□□ -0.98
NEDD8-202ENST00000396828 TGFAP01135 160 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 GYPBP06028 91 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 CLUP10909 449 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 SRD5A1P18405 259 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 SLC2A5P22732 501 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 CSNK1A1P48729 337 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 IDH3GP51553 393 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-202ENST00000396828 UBE2NP61088 152 aaKnown RBP8.9□□□□□ -0.98
NEDD8-202ENST00000396828 SLC35A2P78381 396 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 GLO1Q04760 184 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 RUNX1T1Q06455 604 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 EFNB3Q15768 340 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 ZBTB46Q86UZ6 589 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 TMEM80Q96HE8 168 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 OR2M2Q96R28 347 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 MRPL13Q9BYD1 178 aaKnown RBP8.9□□□□□ -0.98
NEDD8-202ENST00000396828 LINC00470Q9BZP3 86 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 CCDC90BQ9GZT6 254 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 NUAK2Q9H093 628 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 DUSP21Q9H596 190 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 GPR35Q9HC97 309 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 VCX3AQ9NNX9 186 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 OBP2BQ9NPH6 170 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 B3GAT2Q9NPZ5 323 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 HAO2Q9NYQ3 351 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 KCNS2Q9ULS6 477 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 B9D1Q9UPM9 204 aa8.9□□□□□ -0.98
NEDD8-202ENST00000396828 IGHV2OR16-5A0A0B4J2B6 119 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 CCDC182A6NF36 153 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 OR6C65A6NJZ3 312 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 RPL36A-HNRNPH2H7BZ11 118 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 KHDRBS3O75525 346 aaKnown RBP8.89□□□□□ -0.99
NEDD8-202ENST00000396828 RAB36O95755 333 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 HLA-DQA2P01906 255 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 QDPRP09417 244 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms