RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 AKR7LQ8NHP1 331 aa11.49□□□□□ -0.57
VPS26A-203ENST00000395098 HAVCR2Q8TDQ0 301 aa11.49□□□□□ -0.57
VPS26A-203ENST00000395098 STARD4Q96DR4 205 aa11.49□□□□□ -0.57
VPS26A-203ENST00000395098 KCTD7Q96MP8 289 aa11.49□□□□□ -0.57
VPS26A-203ENST00000395098 PLEK2Q9NYT0 353 aa11.49□□□□□ -0.57
VPS26A-203ENST00000395098 TINAGQ9UJW2 476 aa11.49□□□□□ -0.57
VPS26A-203ENST00000395098 TTLL8A6PVC2 850 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 LOC110117498-PIK3R3F6TDL0 507 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 GPRIN2O60269 458 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 SLC19A2O60779 497 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 DBHP09172 617 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 MMP7P09237 267 aaPredicted RBP11.48□□□□□ -0.57
VPS26A-203ENST00000395098 MMP16P51512 607 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 CCR9P51686 369 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 PER3P56645 1201 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 PSG4Q00888 419 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 NRN1LQ496H8 165 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 NAA40Q86UY6 237 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 OR6K3Q8NGY3 331 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 COQ7Q99807 217 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 ATF6BQ99941 703 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 WNT5BQ9H1J7 359 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 OR52A1Q9UKL2 312 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 ZNF835Q9Y2P0 537 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 ARHGAP21Q5T5U3 1957 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 C5orf63A6NC05 138 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 CDRT1O95170 752 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 CGAP01215 116 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 HLA-HP01893 362 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 GALP22466 123 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 IGHV1-2P23083 117 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 HSD11B1P28845 292 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 MPGP29372 298 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 PTGER4P35408 488 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 SF3B4Q15427 424 aaKnown RBP eCLIP11.48□□□□□ -0.571e-8■■□□□ 13.2
VPS26A-203ENST00000395098 TAF13Q15543 124 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 TRAM1Q15629 374 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 HIKESHIQ53FT3 197 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 ZMAT1Q5H9K5 638 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 ZNF676Q8N7Q3 588 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 OR2H1Q9GZK4 316 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 SLIRPQ9GZT3 109 aaKnown RBP11.48□□□□□ -0.57
VPS26A-203ENST00000395098 TPK1Q9H3S4 243 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 NOX3Q9HBY0 568 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 ZNF319Q9P2F9 582 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 NBEAQ8NFP9 2946 aa11.48□□□□□ -0.57
VPS26A-203ENST00000395098 ACACBO00763 2458 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 SPTA1P02549 2419 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 ACOD1A6NK06 481 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TMEM212A6NML5 194 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 E9PLN8 166 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 PIN1P1O15428 100 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 SGCEO43556 437 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 SYNGR3O43761 229 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 FARS2O95363 451 aaKnown RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 CALRP27797 417 aaKnown RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 DCTDP32321 178 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TUBA1BP68363 451 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 YIF1BQ5BJH7 314 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 NCCRP1Q6ZVX7 275 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TUBA1AQ71U36 451 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 OR1K1Q8NGR3 316 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TSC22D3Q99576 134 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 BARHL1Q9BZE3 327 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 SNTG1Q9NSN8 517 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 SH3BGRL2Q9UJC5 107 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 GSTK1Q9Y2Q3 226 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TIMM10BQ9Y5J6 103 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 N6AMT1Q9Y5N5 214 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TPRP12270 2363 aaKnown RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 F5H5K5 113 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 PRRG2O14669 202 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TMIGD3P0DMS9 266 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 GLI4P10075 376 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TIMP3P35625 211 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 CX3CR1P49238 355 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 CAV3P56539 151 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 HGFACQ04756 655 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TSC22D1Q15714 1073 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 ZNF829Q3KNS6 432 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 SFRP5Q5T4F7 317 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 UNQ9370/PRO34162Q6UXP9 181 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 PRSS45Q7RTY3 260 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 KCNJ15Q99712 375 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 PBOV1Q9GZY1 135 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 OPN3Q9H1Y3 402 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-203ENST00000395098 PLSCR4Q9NRQ2 329 aa11.47□□□□□ -0.57
VPS26A-203ENST00000395098 TRBV5-5A0A0J9YX44 114 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 TTRP02766 147 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 CRYGSP22914 178 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 CTSSP25774 331 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 SOX2P48431 317 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 GRB2P62993 217 aaKnown RBP11.46□□□□□ -0.57
VPS26A-203ENST00000395098 SCRN3Q0VDG4 424 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 LSAMPQ13449 338 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 RAB35Q15286 201 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 Q6ZT83 130 aa11.46□□□□□ -0.57
VPS26A-203ENST00000395098 ABHD12BQ7Z5M8 362 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms