RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CYSLTR2Q9NS75 346 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 DUSP13Q9UII6 198 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 KCNG2Q9UJ96 466 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 TRAV1-2A0A0B4J238 106 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 IDSB3KWA1 339 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 FOSL1P15407 271 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 PARM1Q6UWI2 310 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 MSRB3Q8IXL7 192 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 C1orf87Q8N0U7 546 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 CA13Q8N1Q1 262 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 FBXL6Q8N531 539 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 C2CD4CQ8TF44 421 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 FAM234AQ9H0X4 552 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 ERVMER34-1Q9H9K5 563 aa11.94□□□□□ -0.5
LCA5-202ENST00000392959 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 SPINT2O43291 252 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 TMEM127O75204 238 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 OLFM2O95897 454 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 MGMTP16455 207 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 RPL12P30050 165 aaKnown RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 FGF9P31371 208 aaPredicted RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 TMEM71Q6P5X7 295 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 PLXDC2Q6UX71 529 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 INTS12Q96CB8 462 aaKnown RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 GNPNAT1Q96EK6 184 aaPredicted RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 C6orf106Q9H6K1 298 aaPredicted RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 TMEM231Q9H6L2 316 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 ANKRD10Q9NXR5 420 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 UMAD1C9J7I0 102 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 H7BYZ3 331 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 CYB561P49447 251 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 MMP15P51511 669 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 EDDM3BP56851 147 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 ZNF239Q16600 458 aaKnown RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 VWA2Q5GFL6 755 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 KIRREL2Q6UWL6 708 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 Q6ZNB5 142 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 GCNT2Q8N0V5 402 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 OR4C16Q8NGL9 310 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 MITD1Q8WV92 249 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 WDR89Q96FK6 387 aaPredicted RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 RBM38Q9H0Z9 239 aaKnown RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 TXNIPQ9H3M7 391 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 IL20Q9NYY1 176 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 A4GNTQ9UNA3 340 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 SLC5A6Q9Y289 635 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 BTBD17A6NE02 478 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 DEGS1O15121 323 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 OR2C1O95371 312 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 OPRM1P35372 400 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 ELLP55199 621 aaPredicted RBP11.93□□□□□ -0.5
LCA5-202ENST00000392959 RUNX2Q13950 521 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 EXT1Q16394 746 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 THEM4Q5T1C6 240 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 ZBTB37Q5TC79 503 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 ZBTB44Q8NCP5 570 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 OR5M1Q8NGP8 315 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 CCL4L1Q8NHW4 92 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 STT3BQ8TCJ2 826 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 MARCH1Q8TCQ1 289 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 IL21Q9HBE4 155 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 PLAC1Q9HBJ0 212 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 AK3Q9UIJ7 227 aa11.93□□□□□ -0.5
LCA5-202ENST00000392959 TUBAL3A6NHL2 446 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 M0R135 149 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 TPOP07202 933 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 FAM219BQ5XKK7 198 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 TMPRSS7Q7RTY8 843 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 OR51F2Q8NH61 342 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 ST8SIA1Q92185 356 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 ZNF799Q96GE5 643 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 OR2A14Q96R47 310 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 MED29Q9NX70 200 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 ING1Q9UK53 422 aaPredicted RBP11.92□□□□□ -0.5
LCA5-202ENST00000392959 R4GMQ9 66 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 PPM1DO15297 605 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 TXNDC12O95881 172 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 IGHV3-9P01782 118 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 KCNAB1Q14722 419 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 KIAA0040Q15053 153 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 ZNF705AQ6ZN79 300 aaPredicted RBP11.92□□□□□ -0.5
LCA5-202ENST00000392959 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 MFSD4AQ8N468 514 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 RBMXL3Q8N7X1 1067 aaKnown RBP11.92□□□□□ -0.5
LCA5-202ENST00000392959 BCL7CQ8WUZ0 217 aaPredicted RBP11.92□□□□□ -0.5
LCA5-202ENST00000392959 PPP1R1CQ8WVI7 109 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 CDCP1Q9H5V8 836 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 SH3BGRL2Q9UJC5 107 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 DDX60Q8IY21 1712 aaKnown RBP11.92□□□□□ -0.5
LCA5-202ENST00000392959 A0A1W2PNR3 127 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 SCO1O75880 301 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 HRH1P35367 487 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 TAF9Q16594 264 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 LINC00303Q3SY05 128 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 BATF2Q8N1L9 274 aa11.92□□□□□ -0.5
LCA5-202ENST00000392959 SIRT6Q8N6T7 355 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms