RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 EIF2B1Q14232 305 aaKnown RBP17.27■□□□□ 0.35
SSU72-204ENST00000378726 OR6X1Q8NH79 312 aa17.27■□□□□ 0.35
SSU72-204ENST00000378726 GCDHQ92947 438 aaPredicted RBP17.27■□□□□ 0.35
SSU72-204ENST00000378726 PCDHGA9Q9Y5G4 932 aaKnown RBP17.27■□□□□ 0.35
SSU72-204ENST00000378726 GJE1A6NN92 205 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 ZNF726A6NNF4 738 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 TNFSF11O14788 317 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 SCO1O75880 301 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 WDPCPO95876 746 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 IGHG1P01857 330 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 PGA4P0DJD7 388 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 PGA3P0DJD8 388 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 SELENOPP49908 381 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 RAG2P55895 527 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 FOXO1Q12778 655 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 SLC17A1Q14916 467 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 ATP1A1-AS1Q5TC04 95 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 SFRP4Q6FHJ7 346 aaPredicted RBP17.26■□□□□ 0.35
SSU72-204ENST00000378726 UNQ9370/PRO34162Q6UXP9 181 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 SLC51BQ86UW2 128 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 ZNF679Q8IYX0 411 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 CMTM4Q8IZR5 234 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 ZNF671Q8TAW3 534 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 DERL3Q96Q80 235 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 C7orf50Q9BRJ6 194 aaKnown RBP17.26■□□□□ 0.35
SSU72-204ENST00000378726 NAA11Q9BSU3 229 aaPredicted RBP17.26■□□□□ 0.35
SSU72-204ENST00000378726 ABHD6Q9BV23 337 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 C20orf85Q9H1P6 137 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 CACNA1CQ13936 2221 aa17.26■□□□□ 0.35
SSU72-204ENST00000378726 ZFHX2Q9C0A1 2572 aaPredicted RBP17.26■□□□□ 0.35
SSU72-204ENST00000378726 A0A087WV48 116 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 IGHV3-15A0A0B4J1V0 119 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 A0A1B0GVI7 797 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 H0YC42 278 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 GMDSO60547 372 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 ARL6IP5O75915 188 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 PDGFAP04085 211 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 IKZF1Q13422 519 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 DYRK1AQ13627 763 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 EXOSC2Q13868 293 aaKnown RBP17.25■□□□□ 0.35
SSU72-204ENST00000378726 HSD17B12Q53GQ0 312 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 TMEM255AQ5JRV8 349 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 WIPI1Q5MNZ9 446 aaPredicted RBP17.25■□□□□ 0.35
SSU72-204ENST00000378726 CARD17Q5XLA6 110 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 KCTD18Q6PI47 426 aaPredicted RBP17.25■□□□□ 0.35
SSU72-204ENST00000378726 GLB1L2Q8IW92 636 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 ZNF454Q8N9F8 522 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 OR2G2Q8NGZ5 317 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 OR56B4Q8NH76 319 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 OR5AK2Q8NH90 309 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 SMIM4Q8WVI0 70 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 KCNE4Q8WWG9 221 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 KLHL9Q9P2J3 617 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 MRPS18CQ9Y3D5 142 aaKnown RBP17.25■□□□□ 0.35
SSU72-204ENST00000378726 CNOT1A5YKK6 2376 aaKnown RBP17.25■□□□□ 0.35
SSU72-204ENST00000378726 RIF1Q5UIP0 2472 aaKnown RBP17.25■□□□□ 0.35
SSU72-204ENST00000378726 FREM3P0C091 2139 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 RPS10-NUDT3A0A1W2PQS6 291 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 CIB4A0PJX0 185 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 G3V3Q6 166 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 CTDSPLO15194 276 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 CSRP1P21291 193 aaKnown RBP17.25■□□□□ 0.35
SSU72-204ENST00000378726 GDF1P27539 372 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 OR1C1Q15619 314 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 NLRC3Q7RTR2 1065 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 HDDC2Q7Z4H3 204 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 FGD2Q7Z6J4 655 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 KRT77Q7Z794 578 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 SFXN2Q96NB2 322 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 UCN2Q96RP3 112 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 FAM173AQ9BQD7 235 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 ASCL3Q9NQ33 180 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 SCP2D1Q9UJQ7 156 aa17.25■□□□□ 0.35
SSU72-204ENST00000378726 BOKQ9UMX3 212 aaPredicted RBP17.25■□□□□ 0.35
SSU72-204ENST00000378726 CELSR3Q9NYQ7 3312 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 HSPB2A8KAH6 182 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 CDK2AP1O14519 115 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 TOXO94900 526 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 VAMP5O95183 116 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 ZNF250P15622 560 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 MAGEB1P43366 347 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 CLDN17P56750 224 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 ROM1Q03395 351 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 HSPB2Q16082 182 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 TEX30Q5JUR7 227 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 UBE2NLQ5JXB2 153 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 NOXO1Q8NFA2 376 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 GFI1Q99684 422 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 ZNF436Q9C0F3 470 aaPredicted RBP17.24■□□□□ 0.35
SSU72-204ENST00000378726 ZNF292O60281 2723 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 CFDP00746 253 aaPredicted RBP17.24■□□□□ 0.35
SSU72-204ENST00000378726 HRGP04196 525 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 PCK2Q16822 640 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 HES5Q5TA89 166 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 BAIAP2L2Q6UXY1 529 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 Q6ZTK2 550 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 LINGO2Q7L985 606 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 LINC00346Q8IVM7 164 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 GALNT16Q8N428 558 aa17.24■□□□□ 0.35
SSU72-204ENST00000378726 OR2M7Q8NG81 312 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms