RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ZNF519Q8TB69 540 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 WBP1LQ9NX94 342 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 METTL21EPA6NDL7 271 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 C5orf51A6NDU8 294 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 ACKR1Q16570 336 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 PNLIPRP3Q17RR3 467 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 PRTGQ2VWP7 1150 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 OR52W1Q6IF63 320 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 OR4A4PQ8NGN8 299 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 OR52N5Q8NH56 324 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 SELENOIQ9C0D9 397 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 MMP26Q9NRE1 261 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 ZFP57Q9NU63 452 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 RHBDD3Q9Y3P4 386 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 TRBV6-7A0A0A0MS04 114 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 RAB27BO00194 218 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 EFSO43281 561 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 SRSF10O75494 262 aaKnown RBP18.94■□□□□ 0.62
UPF3A-202ENST00000375299 DUS4LO95620 317 aaKnown RBP18.94■□□□□ 0.62
UPF3A-202ENST00000375299 F12P00748 615 aaPredicted RBP18.94■□□□□ 0.62
UPF3A-202ENST00000375299 COL9A1P20849 921 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 NPBWR1P48145 328 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 AIMP2Q13155 320 aaKnown RBP18.94■□□□□ 0.62
UPF3A-202ENST00000375299 C1QL3Q5VWW1 255 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 POMZP3Q6PJE2 187 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 CHRDL2Q6WN34 429 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 LYPD6Q86Y78 171 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 FAM160A2Q8N612 972 aaPredicted RBP18.94■□□□□ 0.62
UPF3A-202ENST00000375299 NKAIN3Q8N8D7 197 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 GABRG3Q99928 467 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 SEC11CQ9BY50 192 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 TREM1Q9NP99 234 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 VSX1Q9NZR4 365 aaPredicted RBP18.94■□□□□ 0.62
UPF3A-202ENST00000375299 RAB22AQ9UL26 194 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 R4GMQ9 66 aa18.94■□□□□ 0.62
UPF3A-202ENST00000375299 TRAV36DV7A0A075B6V5 113 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 LOC107986453A0A1B0GWG9 222 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 A0A1W2PQF6 199 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 DBX1A6NMT0 343 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 GMFGO60234 142 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 CTLA4P16410 223 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 AKR1C4P17516 323 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 CXCR1P25024 350 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 SERPINF1P36955 418 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 SLC22A6Q4U2R8 563 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 NKAPLQ5M9Q1 402 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 MTIF3Q9H2K0 278 aaKnown RBP18.93■□□□□ 0.62
UPF3A-202ENST00000375299 CYTL1Q9NRR1 136 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 DZANK1Q9NVP4 752 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 DNAH14Q0VDD8 3507 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 C13orf42A0A1B0GVH6 325 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 HRH1P35367 487 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 MEOX2P50222 304 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 MAMDC2Q7Z304 686 aaPredicted RBP18.93■□□□□ 0.62
UPF3A-202ENST00000375299 AVL9Q8NBF6 648 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 ADAMTS18Q8TE60 1221 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 SLC37A2Q8TED4 501 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 GLYATL2Q8WU03 294 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 FAM46BQ96A09 425 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 CMBLQ96DG6 245 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 NMES1Q9C002 83 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 LAT2Q9GZY6 243 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 EMC9Q9Y3B6 208 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 CPAMD8Q8IZJ3 1885 aa18.93■□□□□ 0.62
UPF3A-202ENST00000375299 A0A0B4J2A0 478 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 HNRNPA2B1P22626 353 aaKnown RBP18.92■□□□□ 0.62
UPF3A-202ENST00000375299 SLC6A8P48029 635 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 SGCBQ16585 318 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 IL34Q6ZMJ4 242 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 FRMD1Q8N878 549 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 C19orf47Q8N9M1 422 aaKnown RBP18.92■□□□□ 0.62
UPF3A-202ENST00000375299 CHST4Q8NCG5 386 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 DMBX1Q8NFW5 382 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 ELP5Q8TE02 316 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 NUDCD2Q8WVJ2 157 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 TMED6Q8WW62 240 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 SLC25A36Q96CQ1 311 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 TMEM231Q9H6L2 316 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 UQCC1Q9NVA1 299 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 SHPKQ9UHJ6 478 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 APOC1P02654 83 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 SPP1P10451 314 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 ZNF117Q03924 483 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 AVPI1Q5T686 147 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 TMEM131Q92545 1883 aa18.92■□□□□ 0.62
UPF3A-202ENST00000375299 OR5K4A6NMS3 321 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 LMX1BO60663 402 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 ISG15P05161 165 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 ABOP16442 354 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 CX3CR1P49238 355 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 SQSTM1Q13501 440 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 MARCH3Q86UD3 253 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 PARGQ86W56 976 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 CDC6Q99741 560 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 RNF126Q9BV68 326 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 NXF5Q9H1B4 397 aaKnown RBP18.91■□□□□ 0.62
UPF3A-202ENST00000375299 FN3KRPQ9HA64 309 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 G6PC2Q9NQR9 355 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 OR52A1Q9UKL2 312 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 RANBP2P49792 3224 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms