RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 ECH1Q13011 328 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 ALKBH6Q3KRA9 238 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 MBNL2Q5VZF2 373 aaKnown RBP10.3□□□□□ -0.76
HDAC8-201ENST00000373554 ACSM5Q6NUN0 579 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 ZFP1Q6P2D0 407 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 KLF14Q8TD94 323 aaPredicted RBP10.3□□□□□ -0.76
HDAC8-201ENST00000373554 ZNRF4Q8WWF5 429 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 SLC7A6Q92536 515 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 MARS2Q96GW9 593 aaKnown RBP10.3□□□□□ -0.76
HDAC8-201ENST00000373554 CENPNQ96H22 339 aaPredicted RBP10.3□□□□□ -0.76
HDAC8-201ENST00000373554 REG4Q9BYZ8 158 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 GABARAPL1Q9H0R8 117 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 SEMA6AQ9H2E6 1030 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 TUBG2Q9NRH3 451 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 ARFGEF3Q5TH69 2177 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 MED13LQ71F56 2210 aa10.3□□□□□ -0.76
HDAC8-201ENST00000373554 NF1P21359 2839 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 LOC390937A0A1W2PQ73 354 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 NDUFS8O00217 210 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 DBHP09172 617 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 NAT2P11245 290 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 DAOP14920 347 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 IGFBP5P24593 272 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 RPS27P42677 84 aaKnown RBP10.29□□□□□ -0.76
HDAC8-201ENST00000373554 CRISP1P54107 249 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 PCGF3Q3KNV8 242 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 ZMAT1Q5H9K5 638 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 PLBD1Q6P4A8 553 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 TMEM154Q6P9G4 183 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 LYPD4Q6UWN0 246 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 CLEC9AQ6UXN8 241 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 ZNF511Q8NB15 262 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 C10orf105Q8TEF2 133 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 SPTSSAQ969W0 71 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 APOBEC3DQ96AK3 386 aaPredicted RBP10.29□□□□□ -0.76
HDAC8-201ENST00000373554 PIMREGQ9BSJ6 248 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 HCAR1Q9BXC0 346 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 MED20Q9H944 212 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 WDR76Q9H967 626 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 HINT3Q9NQE9 182 aaKnown RBP10.29□□□□□ -0.76
HDAC8-201ENST00000373554 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.29□□□□□ -0.76
HDAC8-201ENST00000373554 CGGBP1Q9UFW8 167 aaPredicted RBP10.29□□□□□ -0.76
HDAC8-201ENST00000373554 OAZ3Q9UMX2 235 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 ACANP16112 2415 aa10.29□□□□□ -0.76
HDAC8-201ENST00000373554 C17orf100A8MU93 164 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 PRODHO43272 600 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 TIMM8AO60220 97 aaPredicted RBP10.28□□□□□ -0.76
HDAC8-201ENST00000373554 GLCEO94923 617 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 GSTT1P30711 240 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 LIPAP38571 399 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 MPV17P39210 176 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 PTGES3Q15185 160 aaKnown RBP10.28□□□□□ -0.76
HDAC8-201ENST00000373554 SNAPC1Q16533 368 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 KLHL12Q53G59 568 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 TEX30Q5JUR7 227 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 LINC01590Q5TEZ4 76 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 TMEM236Q5W0B7 351 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 KDM4DQ6B0I6 523 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 DCXRQ7Z4W1 244 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 ERI1Q8IV48 349 aaKnown RBP10.28□□□□□ -0.76
HDAC8-201ENST00000373554 OR5L1Q8NGL2 311 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 OR6N2Q8NGY6 317 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 UBASH3BQ8TF42 649 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 MAP6Q96JE9 813 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 INTS14Q96SY0 518 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 SMR3AQ99954 134 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 OSBPL10Q9BXB5 764 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 OR51V1Q9H2C8 321 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 CYSLTR2Q9NS75 346 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 DDX28Q9NUL7 540 aaKnown RBP10.28□□□□□ -0.76
HDAC8-201ENST00000373554 TVP23BQ9NYZ1 205 aa10.28□□□□□ -0.76
HDAC8-201ENST00000373554 SAC3D1A6NKF1 404 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 ZNF878C9JN71 531 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 F5H5K5 113 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 ZNF593O00488 134 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-201ENST00000373554 TPD52L2O43399 206 aaKnown RBP10.27□□□□□ -0.77
HDAC8-201ENST00000373554 MITFO75030 526 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-201ENST00000373554 HEXAP06865 529 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 SLC6A9P48067 706 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 ZNF81P51508 661 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 TPTEP56180 551 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 RPS7P62081 194 aaKnown RBP10.27□□□□□ -0.77
HDAC8-201ENST00000373554 TAF13Q15543 124 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 PCK2Q16822 640 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 CXXC5Q7LFL8 322 aaKnown RBP10.27□□□□□ -0.77
HDAC8-201ENST00000373554 CPOQ8IVL8 374 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 ZNF786Q8N393 782 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 MAPK1IP1LQ8NDC0 245 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 ZNF540Q8NDQ6 660 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 PTP4A1Q93096 173 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 CIB1Q99828 191 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 PKP2Q99959 881 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 RBM4BQ9BQ04 359 aaKnown RBP10.27□□□□□ -0.77
HDAC8-201ENST00000373554 COPS4Q9BT78 406 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 GSX1Q9H4S2 264 aaPredicted RBP10.27□□□□□ -0.77
HDAC8-201ENST00000373554 PNRC2Q9NPJ4 139 aaKnown RBP10.27□□□□□ -0.77
HDAC8-201ENST00000373554 NKIRAS2Q9NYR9 191 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 STARD10Q9Y365 291 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 RTTNQ86VV8 2226 aa10.27□□□□□ -0.77
HDAC8-201ENST00000373554 MTORP42345 2549 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms