RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 IMMP1LQ96LU5 166 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 NXT1Q9UKK6 140 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 ZNF337Q9Y3M9 751 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 CPAMD8Q8IZJ3 1885 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 PCSK5Q92824 1860 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 PHF3Q92576 2039 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 ACACAQ13085 2346 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 COL27A1Q8IZC6 1860 aaPredicted RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 TRABD2BA6NFA1 517 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 KHDRBS3O75525 346 aaKnown RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 ECDO95905 644 aaPredicted RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 SELLP14151 372 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 SRMP19623 302 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 NFYAP23511 347 aaPredicted RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 SGCAQ16586 387 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 FCRLAQ7L513 359 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 FAM220AQ7Z4H9 259 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ZNF440Q8IYI8 595 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ZNF417Q8TAU3 575 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 SFT2D1Q8WV19 159 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ZNF775Q96BV0 537 aaPredicted RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 ZNF587Q96SQ5 575 aaPredicted RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 LRFN3Q9BTN0 628 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ALG12Q9BV10 488 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 TSPAN10Q9H1Z9 355 aaPredicted RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 NRIP3Q9NQ35 241 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 HAO2Q9NYQ3 351 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 PLA2G3Q9NZ20 509 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 NUBP2Q9Y5Y2 271 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 AKR7A3O95154 331 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 HLA-DQA2P01906 255 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 PNMTP11086 282 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 PTHLHP12272 177 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 PTGDSP41222 190 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 HAGHLQ6PII5 290 aaPredicted RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 PLXDC2Q6UX71 529 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 DPY19L2P2Q6ZN68 376 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 PDZD9Q8IXQ8 264 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 CMTM4Q8IZR5 234 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 OR4K17Q8NGC6 315 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ADAMTS14Q8WXS8 1223 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 THOC3Q96J01 351 aaKnown RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 EMC6Q9BV81 110 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 HES7Q9BYE0 225 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 TCF7L1Q9HCS4 588 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ABRACLQ9P1F3 81 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 RCE1Q9Y256 329 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 EXPH5Q8NEV8 1989 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 A0A087WV48 116 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 CCDC187A0A096LP49 1063 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 PLSCR5A0PG75 271 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 MCRIP1C9JLW8 97 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 EFNA2O43921 213 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 GDNFP39905 211 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ADH7P40394 386 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 RAD52P43351 418 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 SNRPEP62304 92 aaKnown RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 GABREP78334 506 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 C17orf67Q0P5P2 114 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 GUCA2BQ16661 112 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 SPINK14Q6IE38 97 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 NPEPL1Q8NDH3 523 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 OR52B4Q8NGK2 314 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ADAM19Q9H013 955 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 SYT4Q9H2B2 425 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 MED29Q9NX70 200 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 TAS2R3Q9NYW6 316 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 ZNF69Q9UC07 566 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 WIF1Q9Y5W5 379 aa9.53□□□□□ -0.88
TPM3-212ENST00000368533 COL5A1P20908 1838 aaPredicted RBP9.53□□□□□ -0.88
TPM3-212ENST00000368533 APC2O95996 2303 aa9.52□□□□□ -0.88
TPM3-212ENST00000368533 IGHV3-15A0A0B4J1V0 119 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 PRR33A8MZF0 331 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 LY86O95711 162 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 PVALBP20472 110 aaPredicted RBP9.52□□□□□ -0.89
TPM3-212ENST00000368533 PTAFRP25105 342 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 ITGA3P26006 1051 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 ZNF41P51814 821 aaPredicted RBP9.52□□□□□ -0.89
TPM3-212ENST00000368533 CSRP2Q16527 193 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 C1orf140Q5VVS0 124 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 NDUFAF7Q7L592 441 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 WDFY1Q8IWB7 410 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 WDSUB1Q8N9V3 476 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 OR6N2Q8NGY6 317 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 THEM6Q8WUY1 208 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 CDC6Q99741 560 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 PIPOXQ9P0Z9 390 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 CHCHD2Q9Y6H1 151 aaPredicted RBP9.52□□□□□ -0.89
TPM3-212ENST00000368533 TRAV1-2A0A0B4J238 106 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 A0A1B0GTH9 108 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 OGG1O15527 345 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 ZFPL1O95159 310 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 SLC6A8P48029 635 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 SSR4P51571 173 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 POLR2HP52434 150 aaKnown RBP9.52□□□□□ -0.89
TPM3-212ENST00000368533 LRRN1Q6UXK5 716 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 SYS1Q8N2H4 156 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 DNAAF1Q8NEP3 725 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 EDARADDQ8WWZ3 215 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 C5orf34Q96MH7 638 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms