RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 TDGF1P13385 188 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 RCC1P18754 421 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-201ENST00000361909 FSTP19883 344 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 TBPP20226 339 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 CSNK1EP49674 416 aaKnown RBP17.11■□□□□ 0.33
CMTM3-201ENST00000361909 PPP1R1AQ13522 171 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 RNASE10Q5GAN6 216 aaKnown RBP17.11■□□□□ 0.33
CMTM3-201ENST00000361909 SFTPA2Q8IWL1 248 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF511Q8NB15 262 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 RCBTB1Q8NDN9 531 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 ADAMTS17Q8TE56 1095 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 LIPHQ8WWY8 451 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 SLC6A7Q99884 636 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 CYTL1Q9NRR1 136 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 CKLFQ9UBR5 152 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 COL6A3P12111 3177 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 ELOA3DA6NLF2 546 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-201ENST00000361909 DBX1A6NMT0 343 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 PDGFBP01127 241 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-201ENST00000361909 PRF1P14222 555 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 EMDP50402 254 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 COL9A2Q14055 689 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-201ENST00000361909 ELOA3BQ3SY89 546 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 SCGB2B2Q4G0G5 96 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 TMEM244Q5VVB8 128 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 FBXO42Q6P3S6 717 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 OGFOD3Q6PK18 319 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 FIGLAQ6QHK4 219 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 DBX2Q6ZNG2 339 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 NAA40Q86UY6 237 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF614Q8N883 585 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 ELOA3Q8NG57 546 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 HIF3AQ9Y2N7 669 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 CSAG2Q9Y5P2 127 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 KPTNQ9Y664 436 aa17.1■□□□□ 0.33
CMTM3-201ENST00000361909 THADAQ6YHU6 1953 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 ALOX12BO75342 701 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 FARS2O95363 451 aaKnown RBP17.09■□□□□ 0.33
CMTM3-201ENST00000361909 F12P00748 615 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-201ENST00000361909 LYL1P12980 280 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 ALOX5APP20292 161 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 NFYBP25208 207 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 SDHAP31040 664 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 CDKN2AP42771 156 aaKnown RBP17.09■□□□□ 0.33
CMTM3-201ENST00000361909 SSTP61278 116 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 PRICKLE4Q2TBC4 344 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF627Q7L945 461 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 OR4N5Q8IXE1 308 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 PRSS35Q8N3Z0 413 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 TCTEX1D2Q8WW35 142 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 TMED6Q8WW62 240 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 TM4SF19Q96DZ7 209 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 CST11Q9H112 138 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 MIOXQ9UGB7 285 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 PILRAQ9UKJ1 303 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 CACNA1IQ9P0X4 2223 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 A0A0J9YY10 115 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 MEGF11A6BM72 1044 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 SFTA3P0C7M3 94 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 MUC1P15941 1255 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-201ENST00000361909 HTR2CP28335 458 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF141Q15928 474 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 OR10AC1Q8NH08 325 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 HIST1H2BAQ96A08 127 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 OR2A5Q96R48 311 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 TAAR9Q96RI9 348 aa17.09■□□□□ 0.33
CMTM3-201ENST00000361909 LILRA5A6NI73 299 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 RNASEK-C17orf49H0YIS7 233 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 LAMTOR5O43504 91 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 ICOSLGO75144 302 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 PIAS2O75928 621 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 CD5P06127 495 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 CD2P06729 351 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 RAB6AP20340 208 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 GRK6P43250 576 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 KIR3DL2P43630 455 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 PMPCAQ10713 525 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 OR10K2Q6IF99 312 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 ARMC6Q6NXE6 501 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 BAHD1Q8TBE0 780 aaPredicted RBP17.08■□□□□ 0.33
CMTM3-201ENST00000361909 OR5B2Q96R09 309 aa17.08■□□□□ 0.33
CMTM3-201ENST00000361909 SPAG17Q6Q759 2223 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 KNL1Q8NG31 2342 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 TO15178 435 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 CCKBRP32239 447 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 RUNX2Q13950 521 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 LYSMD4Q5XG99 296 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 RBMS3Q6XE24 437 aaKnown RBP17.08■□□□□ 0.32
CMTM3-201ENST00000361909 ZAR1Q86SH2 424 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 OR51A4Q8NGJ6 313 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 ASB17Q8WXJ9 295 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 WNT2BQ93097 391 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 C14orf79Q96F83 325 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 AQP10Q96PS8 301 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 MICU1Q9BPX6 476 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 LMF2Q9BU23 707 aaKnown RBP17.08■□□□□ 0.32
CMTM3-201ENST00000361909 SELENOIQ9C0D9 397 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 SYT4Q9H2B2 425 aa17.08■□□□□ 0.32
CMTM3-201ENST00000361909 DHCR7Q9UBM7 475 aaKnown RBP17.08■□□□□ 0.32
CMTM3-201ENST00000361909 KLK13Q9UKR3 277 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms