RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 OR2A5Q96R48 311 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 S100A13Q99584 98 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 NRSN2Q9GZP1 204 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 TAF9BQ9HBM6 251 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 CUTCQ9NTM9 273 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 OBP2AQ9NY56 170 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 TMED7Q9Y3B3 224 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 C13orf42A0A1B0GVH6 325 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 STK17BO94768 372 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 CSTBP04080 98 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 ERCC1P07992 297 aaPredicted RBP9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 PAX1P15863 534 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 ST6GAL1P15907 406 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 ADH6P28332 368 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 RPL4P36578 427 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 UCP2P55851 309 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 PKIAP61925 76 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 PMPCAQ10713 525 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 SRSF5Q13243 272 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 SGCGQ13326 291 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNF141Q15928 474 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 CDPF1Q6NVV7 123 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 FBXO42Q6P3S6 717 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 FDX2Q6P4F2 183 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 HEPN1Q6WQI6 88 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 FRMD1Q8N878 549 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 EXD3Q8N9H8 876 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 OR51A4Q8NGJ6 313 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 FAM174AQ8TBP5 190 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 MEGF10Q96KG7 1140 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 NEU1Q99519 415 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 LMF2Q9BU23 707 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 DNAJB12Q9NXW2 375 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 FLVCR1Q9Y5Y0 555 aa9.28□□□□□ -0.92
CHRNA1-202ENST00000348749 NPIPA5A0A0B4J1W7 369 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 A0A1B0GTH9 108 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 NPIPA7E9PJI5 369 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 M0R036 132 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 LDLRAD4O15165 306 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 NUDT21O43809 227 aaKnown RBP9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 YIF1AO95070 293 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 NPIPA8P0DM63 369 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 VAMP1P23763 118 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 DDTP30046 118 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 GABRA3P34903 492 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 SLC26A5P58743 744 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 HSD11B2P80365 405 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 EGR3Q06889 387 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 MGAT2Q10469 447 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 ENPP2Q13822 863 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 TMEM268Q5VZI3 342 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 TMPPEQ6ZT21 453 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 ZNF440Q8IYI8 595 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 ZNF511Q8NB15 262 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 ADAD2Q8NCV1 583 aaKnown RBP9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 RCBTB1Q8NDN9 531 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 RNF128Q8TEB7 428 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 C3orf49Q96BT1 292 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 RASD2Q96D21 266 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 C4orf45Q96LM5 186 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 DEFB118Q96PH6 123 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 SSX3Q99909 188 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 SCRT1Q9BWW7 348 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 LMAN2LQ9H0V9 348 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 PDE7BQ9NP56 450 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 RAB18Q9NP72 206 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 OR2S2Q9NQN1 319 aa9.27□□□□□ -0.93
CHRNA1-202ENST00000348749 ELOA3DA6NLF2 546 aaPredicted RBP9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 SEC14L6B5MCN3 397 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 AGPAT2O15120 278 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 OR10H2O60403 315 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 SERPINA5P05154 406 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 CSN2P05814 226 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 OR8U9P0C7N5 309 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 PET100P0DJ07 73 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 SFTPCP11686 197 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 HTR2CP28335 458 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 SNCAP37840 140 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 KIR3DL2P43630 455 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 RPS4XP62701 263 aaKnown RBP9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 CHAF1BQ13112 559 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 KCNAB1Q14722 419 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 ZNHIT3Q15649 155 aaPredicted RBP9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 ELOA3BQ3SY89 546 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 DEFB134Q4QY38 66 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 ZNF574Q6ZN55 896 aaPredicted RBP9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 Q6ZRG5 221 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 ADGRE4PQ86SQ3 457 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 CD163Q86VB7 1156 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 GKN2Q86XP6 184 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 PRSS35Q8N3Z0 413 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 ELOA3Q8NG57 546 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 OR4S1Q8NGB4 309 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 OR8U1Q8NH10 309 aa9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 TSEN15Q8WW01 171 aaKnown RBP9.26□□□□□ -0.93
CHRNA1-202ENST00000348749 LIPHQ8WWY8 451 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms