RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 OR10AC1Q8NH08 325 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 MCFD2Q8NI22 146 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 FGFBP3Q8TAT2 258 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 KCNJ15Q99712 375 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 COMMD4Q9H0A8 199 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 TPK1Q9H3S4 243 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 UPB1Q9UBR1 384 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 MALT1Q9UDY8 824 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 PRSS50Q9UI38 385 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 OR52A1Q9UKL2 312 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 EMC9Q9Y3B6 208 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 MED12LQ86YW9 2145 aa9.63□□□□□ -0.87
ECM1-201ENST00000346569 TRBV5-7A0A0A0MS05 114 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 MBD3L4A6NDZ8 208 aaPredicted RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 MBD3L3A6NE82 208 aaPredicted RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 MBD3L5A6NJ08 208 aaPredicted RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 ACOD1A6NK06 481 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 ZNF587BE7ETH6 402 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 LOC110117498-PIK3R3F6TDL0 507 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 SYNGR3O43761 229 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 KRT33AO76009 404 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 RAF1P04049 648 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 HOXD4P09016 255 aaPredicted RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 MMP7P09237 267 aaPredicted RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 GABRA1P14867 456 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 B4GALT1P15291 398 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 CALRP27797 417 aaKnown RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 SOX6P35712 828 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 GRB2P62993 217 aaKnown RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 MXD1Q05195 221 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 FAPQ12884 760 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 KRTAP27-1Q3LI81 207 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 CEP78Q5JTW2 689 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 ZNF544Q6NX49 715 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 ZNF585AQ6P3V2 769 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 KLHL24Q6TFL4 600 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 ZNF813Q6ZN06 617 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 NR2C2APQ86WQ0 139 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 MBD3L2Q8NHZ7 208 aaPredicted RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 GPR148Q8TDV2 347 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 ZFAND2BQ8WV99 257 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 DERL3Q96Q80 235 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 OR14A2Q96R54 314 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 NOX4Q9NPH5 578 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 PLSCR4Q9NRQ2 329 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 ZNF224Q9NZL3 707 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 NUFIP1Q9UHK0 495 aaKnown RBP9.62□□□□□ -0.87
ECM1-201ENST00000346569 SLC5A6Q9Y289 635 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 TIMM10BQ9Y5J6 103 aa9.62□□□□□ -0.87
ECM1-201ENST00000346569 RTTNQ86VV8 2226 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 A0A0G2JK05 382 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 A0A1W2PPK0 400 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 CTDSP2O14595 271 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 CASKO14936 926 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 WDR1O75083 606 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 ARL6IP5O75915 188 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 IL18BPO95998 194 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 TTRP02766 147 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 PATE4P0C8F1 98 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 ZNF32P17041 273 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 SRMP19623 302 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 CRYGSP22914 178 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 MPGP29372 298 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 PTGER4P35408 488 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 BMXP51813 675 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 PRKXP51817 358 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 CAV3P56539 151 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 PCBD1P61457 104 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 PSG4Q00888 419 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 ZNF829Q3KNS6 432 aaPredicted RBP9.61□□□□□ -0.87
ECM1-201ENST00000346569 TMEM244Q5VVB8 128 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 OR2A2Q6IF42 318 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 TFAP2EQ6VUC0 442 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 SLC16A14Q7RTX9 510 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 NAA40Q86UY6 237 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 OR51A4Q8NGJ6 313 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 FAM57AQ8TBR7 257 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 ASB5Q8WWX0 329 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 SNRNP40Q96DI7 357 aaKnown RBP9.61□□□□□ -0.87
ECM1-201ENST00000346569 ATF6BQ99941 703 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 SLX1AQ9BQ83 275 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 PBOV1Q9GZY1 135 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 WNT5BQ9H1J7 359 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 PRORYQ9H606 182 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 SLC17A5Q9NRA2 495 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 ZNF319Q9P2F9 582 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 FAM215AQ9Y5M1 114 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 ATRXP46100 2492 aa9.61□□□□□ -0.87
ECM1-201ENST00000346569 BOD1L1Q8NFC6 3051 aa9.6□□□□□ -0.87
ECM1-201ENST00000346569 A0A1B0GTI1 187 aa9.6□□□□□ -0.87
ECM1-201ENST00000346569 IQCMA0A1B0GVH7 501 aa9.6□□□□□ -0.87
ECM1-201ENST00000346569 OR6C6A6NF89 314 aa9.6□□□□□ -0.87
ECM1-201ENST00000346569 SGCEO43556 437 aa9.6□□□□□ -0.87
ECM1-201ENST00000346569 TOXO94900 526 aa9.6□□□□□ -0.87
ECM1-201ENST00000346569 FARS2O95363 451 aaKnown RBP9.6□□□□□ -0.87
ECM1-201ENST00000346569 CNOT4O95628 575 aaKnown RBP9.6□□□□□ -0.87
ECM1-201ENST00000346569 CGAP01215 116 aa9.6□□□□□ -0.87
ECM1-201ENST00000346569 CRHP06850 196 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms