RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 BCKDHBP21953 392 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 CORO6Q6QEF8 472 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 ZNF813Q6ZN06 617 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 TMUB2Q71RG4 321 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 RABEPKQ7Z6M1 372 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 NAXDQ8IW45 347 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 SLC38A9Q8NBW4 561 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 PMEPA1Q969W9 287 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 WBP1Q96G27 269 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 C5orf34Q96MH7 638 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 TINAGL1Q9GZM7 467 aaPredicted RBP12.98□□□□□ -0.33
TDP2-201ENST00000341060 FXYD6Q9H0Q3 95 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 MYOZ1Q9NP98 299 aaPredicted RBP12.98□□□□□ -0.33
TDP2-201ENST00000341060 FAM206AQ9NX38 181 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 ALKBH4Q9NXW9 302 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 EML6Q6ZMW3 1958 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 TMEM200CA6NKL6 621 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 ZNF736B4DX44 427 aaPredicted RBP12.98□□□□□ -0.33
TDP2-201ENST00000341060 B8ZZF3 427 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 H3BML4 177 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 M0QYG6 137 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 P2RY10O00398 339 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 B3GALNT1O75752 331 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 HEXBP07686 556 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 ACSM4P0C7M7 580 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 ZNF735P0CB33 412 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 PPP3CBP16298 524 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 PI4KAP42356 2102 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 STARD6P59095 220 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 GMFBP60983 142 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 SFRP5Q5T4F7 317 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 OR10K2Q6IF99 312 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 RBPMSQ93062 196 aaKnown RBP12.98□□□□□ -0.33
TDP2-201ENST00000341060 ARL6Q9H0F7 186 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 ZMAT3Q9HA38 289 aaKnown RBP12.98□□□□□ -0.33
TDP2-201ENST00000341060 SERINC1Q9NRX5 453 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 CENPMQ9NSP4 180 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 RDH8Q9NYR8 311 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 KLHL13Q9P2N7 655 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 KCNN3Q9UGI6 736 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 GDF2Q9UK05 429 aaPredicted RBP12.98□□□□□ -0.33
TDP2-201ENST00000341060 KLK13Q9UKR3 277 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 TMEM235A6NFC5 223 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 ALOX12BO75342 701 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 TTRP02766 147 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 NAGAP17050 411 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 BIDP55957 195 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 RAB12Q6IQ22 244 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 PAPD4Q6PIY7 484 aaKnown RBP12.97□□□□□ -0.33
TDP2-201ENST00000341060 TMPRSS9Q7Z410 1059 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 EDAQ92838 391 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 SLAMF6Q96DU3 332 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 SHDQ96IW2 340 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 EDEM2Q9BV94 578 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 MED9Q9NWA0 146 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 MYEF2Q9P2K5 600 aaKnown RBP12.97□□□□□ -0.33
TDP2-201ENST00000341060 PISDQ9UG56 409 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 CYB5R1Q9UHQ9 305 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 RPH3AQ9Y2J0 694 aaPredicted RBP12.97□□□□□ -0.33
TDP2-201ENST00000341060 hCG_1807616A0A1W2PRN6 198 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 METTL21EPA6NDL7 271 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 EIF1AYO14602 144 aaKnown RBP12.97□□□□□ -0.33
TDP2-201ENST00000341060 RPA2P15927 270 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 HSD11B1P28845 292 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 BDKRB2P30411 391 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 CALCRP30988 508 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 GPR85P60893 370 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 NR0B2Q15466 257 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 NKAIN1Q4KMZ8 207 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 ATPAF1Q5TC12 328 aaPredicted RBP12.97□□□□□ -0.33
TDP2-201ENST00000341060 TMEM71Q6P5X7 295 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 C12orf45Q8N5I9 185 aaPredicted RBP12.97□□□□□ -0.33
TDP2-201ENST00000341060 ACBD4Q8NC06 268 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 SCARB1Q8WTV0 552 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 C11orf40Q8WZ69 217 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 AQP3Q92482 292 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 CCDC120Q96HB5 630 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 MRGPRX4Q96LA9 322 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 CNTD2Q9H8S5 307 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 ZNF224Q9NZL3 707 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 KLRF1Q9NZS2 232 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 B3GAT1Q9P2W7 334 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 RAB22AQ9UL26 194 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 HRH3Q9Y5N1 445 aa12.97□□□□□ -0.33
TDP2-201ENST00000341060 TRBV11-1A0A0K0K1C0 115 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 SHISA8B8ZZ34 492 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 RAB27BO00194 218 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 EFNA2O43921 213 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 NMBP08949 121 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 POU3F2P20265 443 aaPredicted RBP12.96□□□□□ -0.33
TDP2-201ENST00000341060 ZNF41P51814 821 aaPredicted RBP12.96□□□□□ -0.33
TDP2-201ENST00000341060 HYAL4Q2M3T9 481 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 PLPPR5Q32ZL2 321 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 SLC25A53Q5H9E4 307 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 LY6G6FQ5SQ64 297 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 CLVS2Q5SYC1 327 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 GSG1LQ6UXU4 331 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 ZNF574Q6ZN55 896 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms