RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 BTCP35070 178 aa11.18□□□□□ -0.62
LIMK1-201ENST00000336180 MRPS15P82914 257 aaKnown RBP11.18□□□□□ -0.62
LIMK1-201ENST00000336180 EGR3Q06889 387 aa11.18□□□□□ -0.62
LIMK1-201ENST00000336180 TAF13Q15543 124 aa11.18□□□□□ -0.62
LIMK1-201ENST00000336180 BTN2A1Q7KYR7 527 aa11.18□□□□□ -0.62
LIMK1-201ENST00000336180 ST7LQ8TDW4 575 aa11.18□□□□□ -0.62
LIMK1-201ENST00000336180 RNF128Q8TEB7 428 aa11.18□□□□□ -0.62
LIMK1-201ENST00000336180 ST8SIA2Q92186 375 aa11.18□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF319Q9P2F9 582 aa11.18□□□□□ -0.62
LIMK1-201ENST00000336180 NCOA6Q14686 2063 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-201ENST00000336180 ORC5O43913 435 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 LIFP15018 202 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 ABOP16442 354 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 ACP1P24666 158 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 POU3F4P49335 361 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 P2RY4P51582 365 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 GLYATL3Q5SZD4 288 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF544Q6NX49 715 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 KCTD18Q6PI47 426 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-201ENST00000336180 DND1Q8IYX4 353 aaKnown RBP11.17□□□□□ -0.62
LIMK1-201ENST00000336180 OR51E1Q8TCB6 317 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 ASB5Q8WWX0 329 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 PHF21AQ96BD5 680 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 CMBLQ96DG6 245 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF845Q96IR2 970 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-201ENST00000336180 A0A1W2PQ72 361 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 TMEM212A6NML5 194 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 E9PLN8 166 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 F5H5K5 113 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 TSPAN4O14817 238 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 IGF2P01344 180 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 CSN2P05814 226 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 DBHP09172 617 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 ITGA3P26006 1051 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 MLF1P58340 268 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 ACER2Q5QJU3 275 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 HES3Q5TGS1 186 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 PYHIN1Q6K0P9 492 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 OR10A4Q9H209 315 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 GDF2Q9UK05 429 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-201ENST00000336180 SLC5A6Q9Y289 635 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 B3GALT5Q9Y2C3 310 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 LHFPL6Q9Y693 200 aa11.17□□□□□ -0.62
LIMK1-201ENST00000336180 TRAV18A0A075B6X5 111 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 OR5H15A6NDH6 313 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ERVH48-1M5A8F1 160 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 CXCL13O43927 109 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 TNFSF15O95150 251 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 GAAP10253 952 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 NTF4P34130 210 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 EXT1Q16394 746 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 TIGD3Q6B0B8 471 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 TMPPEQ6ZT21 453 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF627Q7L945 461 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 DTX1Q86Y01 620 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 OR5D18Q8NGL1 313 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 OR13C9Q8NGT0 318 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 SIGLEC12Q96PQ1 595 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 MICU1Q9BPX6 476 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 KLHL9Q9P2J3 617 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 FBXO4Q9UKT5 387 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 FREM1Q5H8C1 2179 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 CEP250Q9BV73 2442 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 TRAV20A0A0B4J274 112 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 TRBV5-5A0A0J9YX44 114 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 SPAARA0A1B0GVQ0 90 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF208O43345 1280 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 HLA-DQB1P01920 261 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 P04436 131 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 PGA4P0DJD7 388 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 PGA3P0DJD8 388 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 SLC6A9P48067 706 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 TRA2AQ13595 282 aaKnown RBP eCLIP11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 FADS6Q8N9I5 356 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 LIN37Q96GY3 246 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ALKBH3Q96Q83 286 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-201ENST00000336180 KCNJ15Q99712 375 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ATG5Q9H1Y0 275 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ABRACLQ9P1F3 81 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 NCKAP5O14513 1909 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 IGHG1P01857 330 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 FAM157BP0CG42 384 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 GDF1P27539 372 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 SUCLG1P53597 346 aaKnown RBP11.16□□□□□ -0.62
LIMK1-201ENST00000336180 C2orf76Q3KRA6 126 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ZFP69Q49AA0 526 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 UBE2NLQ5JXB2 153 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 FAM57BQ71RH2 274 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 CATSPERDQ86XM0 798 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 TEX19Q8NA77 164 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 NOXO1Q8NFA2 376 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 OR4D10Q8NGI6 311 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 KIAA1143Q96AT1 154 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-201ENST00000336180 KCTD12Q96CX2 325 aaKnown RBP11.16□□□□□ -0.62
LIMK1-201ENST00000336180 ADAT3Q96EY9 351 aaPredicted RBP11.16□□□□□ -0.62
LIMK1-201ENST00000336180 CACNG6Q9BXT2 260 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 STRADBQ9C0K7 418 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 G6PC2Q9NQR9 355 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 FOXJ3Q9UPW0 622 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms