RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SLC25A15Q9Y619 301 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 C16orf97H3BN30 126 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 H2BFMP0C1H6 154 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 CRYGSP22914 178 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 PSMB10P40306 273 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 GTF2A1P52655 376 aaPredicted RBP18.72■□□□□ 0.59
TPM1-204ENST00000334895 GP2P55259 537 aaKnown RBP18.72■□□□□ 0.59
TPM1-204ENST00000334895 TIMM23BQ5SRD1 257 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 TMEM53Q6P2H8 277 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 KCTD20Q7Z5Y7 419 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 STEAP2Q8NFT2 490 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 OR1F12Q8NHA8 337 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 MRPL48Q96GC5 212 aaKnown RBP18.72■□□□□ 0.59
TPM1-204ENST00000334895 BABAM2Q9NXR7 383 aa18.72■□□□□ 0.59
TPM1-204ENST00000334895 DOPEY2Q9Y3R5 2298 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 SRSF10O75494 262 aaKnown RBP18.71■□□□□ 0.59
TPM1-204ENST00000334895 RPP14O95059 124 aaKnown RBP18.71■□□□□ 0.59
TPM1-204ENST00000334895 AGFG2O95081 481 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 DBHP09172 617 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 HOXC12P31275 282 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 TFF3Q07654 80 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 KRTAP27-1Q3LI81 207 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 MYPOPQ86VE0 399 aaPredicted RBP18.71■□□□□ 0.59
TPM1-204ENST00000334895 EGFL6Q8IUX8 553 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 HSD17B8Q92506 261 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 FCGR1BQ92637 280 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 RORBQ92753 470 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 COG8Q96MW5 612 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 OPALINQ96PE5 141 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 COQ7Q99807 217 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 OBP2BQ9NPH6 170 aa18.71■□□□□ 0.59
TPM1-204ENST00000334895 SIRT4Q9Y6E7 314 aaPredicted RBP18.71■□□□□ 0.59
TPM1-204ENST00000334895 ZNF254O75437 659 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 CELA3BP08861 270 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 RNF224P0DH78 156 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 AGAP20933 346 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 GRNP28799 593 aaKnown RBP18.71■□□□□ 0.58
TPM1-204ENST00000334895 OTX1P32242 354 aaPredicted RBP18.71■□□□□ 0.58
TPM1-204ENST00000334895 HTR5AP47898 357 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 ALDH3B2P48448 385 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 RIDAP52758 137 aaKnown RBP18.71■□□□□ 0.58
TPM1-204ENST00000334895 ACSM1Q08AH1 577 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 RAB39AQ14964 217 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 TAB1Q15750 504 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 SYT6Q5T7P8 510 aaPredicted RBP18.71■□□□□ 0.58
TPM1-204ENST00000334895 FAM220AQ7Z4H9 259 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 RNASE6Q93091 150 aaKnown RBP18.71■□□□□ 0.58
TPM1-204ENST00000334895 MS4A3Q96HJ5 214 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 MGLLQ99685 303 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 AMDHD2Q9Y303 409 aa18.71■□□□□ 0.58
TPM1-204ENST00000334895 SPTBN1Q01082 2364 aaKnown RBP18.7■□□□□ 0.58
TPM1-204ENST00000334895 CLEC18AA5D8T8 446 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 PNPP00491 289 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 TACSTD2P09758 323 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 HSMCR30P0CW71 290 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 ZNF14P17017 642 aaPredicted RBP18.7■□□□□ 0.58
TPM1-204ENST00000334895 ANOS1P23352 680 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 APEX1P27695 318 aaKnown RBP18.7■□□□□ 0.58
TPM1-204ENST00000334895 NR1H2P55055 460 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 NANOS3P60323 173 aaKnown RBP18.7■□□□□ 0.58
TPM1-204ENST00000334895 HGFACQ04756 655 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 MFGE8Q08431 387 aaPredicted RBP18.7■□□□□ 0.58
TPM1-204ENST00000334895 TIGD6Q17RP2 521 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 SEZ6L2Q6UXD5 910 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 CLEC18BQ6UXF7 455 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 P2RY8Q86VZ1 359 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 ZFP41Q8N8Y5 198 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 CLEC18CQ8NCF0 446 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 MYCBPQ99417 103 aaPredicted RBP18.7■□□□□ 0.58
TPM1-204ENST00000334895 KCNJ15Q99712 375 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 C1QTNF6Q9BXI9 259 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 VCX3AQ9NNX9 186 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 KCNJ16Q9NPI9 418 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 ST6GALNAC2Q9UJ37 374 aa18.7■□□□□ 0.58
TPM1-204ENST00000334895 LOC100509620A0A075B734 347 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 IGKV3-15P01624 115 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 CBR1P16152 277 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 PSMB9P28065 219 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 DCTDP32321 178 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 PRKXP51817 358 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 GRB2P62993 217 aaKnown RBP18.69■□□□□ 0.58
TPM1-204ENST00000334895 GALK2Q01415 458 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 ECH1Q13011 328 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 TAF13Q15543 124 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 XKRXQ6PP77 449 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.69■□□□□ 0.58
TPM1-204ENST00000334895 ALDH16A1Q8IZ83 802 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 ZNF808Q8N4W9 903 aaPredicted RBP18.69■□□□□ 0.58
TPM1-204ENST00000334895 TMIGD2Q96BF3 282 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 OR10A4Q9H209 315 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 TRIM36Q9NQ86 728 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 ATPIF1Q9UII2 106 aa18.69■□□□□ 0.58
TPM1-204ENST00000334895 HCFC1P51610 2035 aa18.68■□□□□ 0.58
TPM1-204ENST00000334895 SERPINA5P05154 406 aa18.68■□□□□ 0.58
TPM1-204ENST00000334895 COX5BP10606 129 aa18.68■□□□□ 0.58
TPM1-204ENST00000334895 IDH3GP51553 393 aaPredicted RBP18.68■□□□□ 0.58
TPM1-204ENST00000334895 MLLT11Q13015 90 aaPredicted RBP18.68■□□□□ 0.58
TPM1-204ENST00000334895 BLMHQ13867 455 aa18.68■□□□□ 0.58
TPM1-204ENST00000334895 ARMCX4Q5H9R4 360 aa18.68■□□□□ 0.58
TPM1-204ENST00000334895 LRRC46Q96FV0 321 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms