RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 STARD10Q9Y365 291 aa13.17□□□□□ -0.3
FOXR1-201ENST00000317011 PLSCR5A0PG75 271 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 OR6C6A6NF89 314 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 XKRYO14609 159 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 IMPA2O14732 288 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 SGCEO43556 437 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 VENTXO95231 258 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 GADD45GO95257 159 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 MPZL1O95297 269 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 FCGR1AP12314 374 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 FASP25445 335 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 CDKN2AP42771 156 aaKnown RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 PPP1R8Q12972 351 aaKnown RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 RCN1Q15293 331 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 ATP6AP1Q15904 470 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 FAHD2BQ6P2I3 314 aaPredicted RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 Q6ZR03 302 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 PTCHD4Q6ZW05 846 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 USP43Q70EL4 1123 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 ZER1Q7Z7L7 766 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 GLB1L2Q8IW92 636 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 SEMA6DQ8NFY4 1073 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 PTP4A1Q93096 173 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 RAB39BQ96DA2 213 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 FAHD2AQ96GK7 314 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 TIMD4Q96H15 378 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 SAMD8Q96LT4 415 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 ZNF570Q96NI8 536 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 EGLN1Q9GZT9 426 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 POFUT1Q9H488 388 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 METTL17Q9H7H0 456 aaPredicted RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 REEP1Q9H902 201 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 DNAJB9Q9UBS3 223 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 PURGQ9UJV8 347 aaKnown RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 COA3Q9Y2R0 106 aaPredicted RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 SAMHD1Q9Y3Z3 626 aaKnown RBP13.16□□□□□ -0.3
FOXR1-201ENST00000317011 U3KQV3 271 aa13.16□□□□□ -0.3
FOXR1-201ENST00000317011 PPIAL4EA0A075B759 164 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 PPIAL4CA0A0B4J2A2 164 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 TRBV4-1A0A0J9YWV2 114 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 PPIAL4DF5H284 164 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 J3QLI3 93 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 TNFRSF11BO00300 401 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 SLC16A7O60669 478 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 E2F6O75461 281 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 ABHD16AO95870 558 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 PNPP00491 289 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 PPIAL4FP0DN26 164 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 SMIM11AP58511 58 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 SLC3A1Q07837 685 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 AQP6Q13520 282 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 KRR1Q13601 381 aaKnown RBP13.15□□□□□ -0.3
FOXR1-201ENST00000317011 RSPO1Q2MKA7 263 aaPredicted RBP13.15□□□□□ -0.3
FOXR1-201ENST00000317011 TUSC1Q2TAM9 212 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 AMIGO2Q86SJ2 522 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 ADCK1Q86TW2 530 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 NPEPL1Q8NDH3 523 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 RASD2Q96D21 266 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 CMBLQ96DG6 245 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 PKP2Q99959 881 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 NUAK2Q9H093 628 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 SYT4Q9H2B2 425 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 SEMA6AQ9H2E6 1030 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 MSL2Q9HCI7 577 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 ATPIF1Q9UII2 106 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 POLR3KQ9Y2Y1 108 aaPredicted RBP13.15□□□□□ -0.3
FOXR1-201ENST00000317011 IER3IP1Q9Y5U9 82 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 LYVE1Q9Y5Y7 322 aa13.15□□□□□ -0.3
FOXR1-201ENST00000317011 J3QW42 95 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 ARPC3O15145 178 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 TPD52L2O43399 206 aaKnown RBP13.14□□□□□ -0.31
FOXR1-201ENST00000317011 BAG2O95816 211 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 IGHV2-70P01814 119 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 GATA3P23771 443 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 RFX4Q33E94 735 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 KRTAP27-1Q3LI81 207 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 ZMAT1Q5H9K5 638 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 ZNF283Q8N7M2 679 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 OR1F12Q8NHA8 337 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 COG8Q96MW5 612 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 DCLRE1CQ96SD1 692 aaKnown RBP13.14□□□□□ -0.31
FOXR1-201ENST00000317011 NDEL1Q9GZM8 345 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 OPN4Q9UHM6 478 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 NPTNQ9Y639 398 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 NBEAL1Q6ZS30 2694 aa13.14□□□□□ -0.31
FOXR1-201ENST00000317011 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 UNC119BA6NIH7 251 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 DCTN6O00399 190 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 DOK2O60496 412 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 FSHBP01225 129 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 RAC2P15153 192 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 GSTM3P21266 225 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 HTR5AP47898 357 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 TNFAIP6P98066 277 aaPredicted RBP13.13□□□□□ -0.31
FOXR1-201ENST00000317011 SMARCD3Q6STE5 483 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 FBXW12Q6X9E4 464 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms