RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 Q96M85 177 aa7.96□□□□□ -1.14
SCUBE3-201ENST00000274938 BANF2Q9H503 90 aa7.96□□□□□ -1.14
SCUBE3-201ENST00000274938 FGF20Q9NP95 211 aaPredicted RBP7.96□□□□□ -1.14
SCUBE3-201ENST00000274938 MMP26Q9NRE1 261 aa7.96□□□□□ -1.14
SCUBE3-201ENST00000274938 HS3ST2Q9Y278 367 aa7.96□□□□□ -1.14
SCUBE3-201ENST00000274938 A0A0U1RQS6 177 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 ZNF865P0CJ78 1059 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SCGB1C2P0DMR2 95 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 TMEM11P17152 192 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CLDN2P57739 230 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 ERHP84090 104 aaKnown RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 LSRQ86X29 649 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 HGDQ93099 445 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 TIMM10BQ9Y5J6 103 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 A0A0B4J203 849 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 TRAV1-2A0A0B4J238 106 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 M0R143 59 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CER1O95813 267 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SDHAP31040 664 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 GPR12P47775 334 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 PCBP4P57723 403 aaKnown RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 FXNQ16595 210 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 ZNF528Q3MIS6 628 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 AGBL5Q8NDL9 886 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 H1FXQ92522 213 aaKnown RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SMIM19Q96E16 107 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 LMO7Q8WWI1 1683 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 ELOA3CA0A087WX78 387 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SLCO2B1O94956 709 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 RPA2P15927 270 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 NAT1P18440 290 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CD38P28907 300 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CLLU1OSQ5K130 101 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 ZNF429Q86V71 674 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 ARHGEF39Q8N4T4 335 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 TRAPPC1Q9Y5R8 145 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 COL1A1P02452 1464 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CNMDO75829 334 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SLC25A6P12236 298 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 MMP15P51511 669 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 UBE2MP61081 183 aaKnown RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CDK5R1Q15078 307 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 OLIG1Q8TAK6 271 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CRYGNQ8WXF5 182 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CMBLQ96DG6 245 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SLAMF6Q96DU3 332 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 TOE1Q96GM8 510 aaKnown RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 BARX1Q9HBU1 254 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CHST11Q9NPF2 352 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 C19orf53Q9UNZ5 99 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SLC5A6Q9Y289 635 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 XRCC2O43543 280 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 ARRB2P32121 409 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 DRAM2Q6UX65 266 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SLC39A11Q8N1S5 342 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 TTC9BQ8N6N2 239 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 TMEM178AQ8NBL3 297 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 MAP6Q96JE9 813 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 PTDSS2Q9BVG9 487 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 COL2A1P02458 1487 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CCDC187A0A096LP49 1063 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CLDN34H7C241 214 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CST4P01036 141 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 NID1P14543 1247 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 CSF2RBP32927 897 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 MRPS21P82921 87 aaKnown RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 OR51F2Q8NH61 342 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 S1PR3Q99500 378 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 GPR173Q9NS66 373 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 SLC17A4Q9Y2C5 497 aa7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 MED1Q15648 1581 aaPredicted RBP7.95□□□□□ -1.14
SCUBE3-201ENST00000274938 OR7C2O60412 319 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 OR5H8P0DN80 308 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 FABP4P15090 132 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 TOMM34Q15785 309 aaPredicted RBP7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 OR2M7Q8NG81 312 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 OR2A1Q8NGT9 310 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 PFN4Q8NHR9 129 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 WDR61Q9GZS3 305 aaKnown RBP7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 TRAV20A0A0B4J274 112 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 OR5G3P0C626 314 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 APEHP13798 732 aaKnown RBP7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 ARSAP15289 507 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 MAT1AQ00266 395 aaKnown RBP7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 ERV3-1Q14264 604 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 EXT1Q16394 746 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 GLDNQ6ZMI3 551 aaPredicted RBP7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 ARRDC1Q8N5I2 433 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 CALHM2Q9HA72 323 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 HINT3Q9NQE9 182 aaKnown RBP7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 R4GMQ9 66 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 LOC102723971A0A1B0GUV8 181 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 M0QZK8 103 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 TAPBPO15533 448 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 AKR7A2O43488 359 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 SIGLEC6O43699 453 aa7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 GGCTO75223 188 aaKnown RBP7.94□□□□□ -1.14
SCUBE3-201ENST00000274938 HES1Q14469 280 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms