RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SLX1AQ9BQ83 275 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 WACQ9BTA9 647 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 NXF2Q9GZY0 626 aaKnown RBP8.3□□□□□ -1.08
NIP7-202ENST00000254941 TPK1Q9H3S4 243 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 G6PC2Q9NQR9 355 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 FAM206AQ9NX38 181 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 PRSS50Q9UI38 385 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 SLC5A6Q9Y289 635 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 A3GALT2U3KPV4 340 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 ACACBO00763 2458 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 PKD1L2Q7Z442 2459 aa8.3□□□□□ -1.08
NIP7-202ENST00000254941 MYO7BQ6PIF6 2116 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 PCNX1Q96RV3 2341 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 TRBV5-5A0A0J9YX44 114 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 SHISA3A0PJX4 238 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 ZNF879B4DU55 563 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 ARL6IP5O75915 188 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 FARS2O95363 451 aaKnown RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 CNOT4O95628 575 aaKnown RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 ISG15P05161 165 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 UCHL1P09936 223 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 HSD11B1P28845 292 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 MPGP29372 298 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 OTX1P32242 354 aaPredicted RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 KIR2DL2P43627 348 aaPredicted RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 MTNR1BP49286 362 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 RORCP51449 518 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 FOXG1P55316 489 aaPredicted RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 PSMA6P60900 246 aaKnown RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 PCBD1P61457 104 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 ARF1P84077 181 aaKnown RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 MXD1Q05195 221 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 SCRN3Q0VDG4 424 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 TAF13Q15543 124 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 ZNF404Q494X3 552 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 Q499Y3 187 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 ELFN2Q5R3F8 820 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 RTL6Q6ICC9 239 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 SKA3Q8IX90 412 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 KDF1Q8NAX2 398 aaPredicted RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 FAM57AQ8TBR7 257 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 TBC1D15Q8TC07 691 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 GPR148Q8TDV2 347 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 PPP1R14AQ96A00 147 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 SNRNP40Q96DI7 357 aaKnown RBP8.29□□□□□ -1.08
NIP7-202ENST00000254941 KCNJ15Q99712 375 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 BARHL1Q9BZE3 327 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 MMP27Q9H306 513 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 PRORYQ9H606 182 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 SNTG1Q9NSN8 517 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 PLEK2Q9NYT0 353 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 OR52A1Q9UKL2 312 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 SLC22A13Q9Y226 551 aa8.29□□□□□ -1.08
NIP7-202ENST00000254941 TRAV1-2A0A0B4J238 106 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 CASKO14936 926 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 SGCEO43556 437 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 SYNGR3O43761 229 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 IL18BPO95998 194 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 TPOP07202 933 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 HOXD4P09016 255 aaPredicted RBP8.28□□□□□ -1.08
NIP7-202ENST00000254941 OCM2P0CE71 109 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 ZNF32P17041 273 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 MAPK3P27361 379 aaPredicted RBP8.28□□□□□ -1.08
NIP7-202ENST00000254941 RAB35Q15286 201 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 RSPO1Q2MKA7 263 aaPredicted RBP8.28□□□□□ -1.08
NIP7-202ENST00000254941 TFAP2EQ6VUC0 442 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 ZNF704Q6ZNC4 412 aaPredicted RBP8.28□□□□□ -1.08
NIP7-202ENST00000254941 SEM1Q6ZVN7 128 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 SLC16A14Q7RTX9 510 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 CD163Q86VB7 1156 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 TPRA1Q86W33 373 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 RDH10Q8IZV5 341 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 OR51A4Q8NGJ6 313 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 OR6K3Q8NGY3 331 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 OR10AC1Q8NH08 325 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 MCFD2Q8NI22 146 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 DERL3Q96Q80 235 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 HDHD2Q9H0R4 259 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 MOB1AQ9H8S9 216 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 ZNF224Q9NZL3 707 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 GTF2A1LQ9UNN4 478 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 TIMM10BQ9Y5J6 103 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 FAM215AQ9Y5M1 114 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 SHANK1Q9Y566 2161 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 POLEQ07864 2286 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 A0A1W2PPK0 400 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 PIN1P1O15428 100 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 TTRP02766 147 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 RAF1P04049 648 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 CRHP06850 196 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 ITGA5P08648 1049 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 MMP7P09237 267 aaPredicted RBP8.28□□□□□ -1.08
NIP7-202ENST00000254941 CLEC2LP0C7M8 214 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 UBCP0CG48 685 aaKnown RBP8.28□□□□□ -1.08
NIP7-202ENST00000254941 ABOP16442 354 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 PAX7P23759 505 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 MYL9P24844 172 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 PRKXP51817 358 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 PSG4Q00888 419 aa8.28□□□□□ -1.08
NIP7-202ENST00000254941 GALK2Q01415 458 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms