RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 C1orf198Q9H425 327 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 RBFOX1Q9NWB1 397 aaKnown RBP16.69■□□□□ 0.26
TRIM47-201ENST00000254816 SPRR3Q9UBC9 169 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 EMC9Q9Y3B6 208 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 HSPB2A8KAH6 182 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 H2BFMP0C1H6 154 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 GSTT2P0CG29 244 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 GSTT2BP0CG30 244 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 PTBP1P26599 531 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRIM47-201ENST00000254816 RIN1Q13671 783 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 HSPB2Q16082 182 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 ZFP69Q49AA0 526 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 C10orf128Q5T292 105 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 LRRC28Q86X40 367 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-201ENST00000254816 FNDC9Q8TBE3 224 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 HAVCR2Q8TDQ0 301 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 RNF133Q8WVZ7 376 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 PNPLA2Q96AD5 504 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 COMMD4Q9H0A8 199 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 SLC25A18Q9H1K4 315 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 BRD7Q9NPI1 651 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 CYSLTR2Q9NS75 346 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 FREM1Q5H8C1 2179 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 TRGV5A0A0B4J1U4 118 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 ANKRD61A6NGH8 418 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 DHHO43323 396 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 SRSF10O75494 262 aaKnown RBP16.68■□□□□ 0.26
TRIM47-201ENST00000254816 GATBO75879 557 aaKnown RBP16.68■□□□□ 0.26
TRIM47-201ENST00000254816 WISP2O76076 250 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 NR2C1P13056 603 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 DDOSTP39656 456 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 HSD17B12Q53GQ0 312 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 MZT2BQ6NZ67 158 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 PAMR1Q6UXH9 720 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-201ENST00000254816 LRRC18Q8N456 261 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 TEX19Q8NA77 164 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 OR2AJ1Q8NGZ0 328 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 SLC7A6Q92536 515 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 ALKBH3Q96Q83 286 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-201ENST00000254816 ZNF416Q9BWM5 594 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 ZDHHC11Q9H8X9 412 aa16.68■□□□□ 0.26
TRIM47-201ENST00000254816 MOV10Q9HCE1 1003 aaKnown RBP16.68■□□□□ 0.26
TRIM47-201ENST00000254816 RANGRFQ9HD47 186 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-201ENST00000254816 FAM240BA0A1B0GVZ2 78 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 TMEM212A6NML5 194 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 RER1O15258 196 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 ZNHIT1O43257 154 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 SLC43A1O75387 559 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 ZNF133P52736 654 aaPredicted RBP16.67■□□□□ 0.26
TRIM47-201ENST00000254816 TATDN3Q17R31 274 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 FDX2Q6P4F2 183 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 TPRA1Q86W33 373 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 CATSPERDQ86XM0 798 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 UPRTQ96BW1 309 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 DERL3Q96Q80 235 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 FYTTD1Q96QD9 318 aaKnown RBP16.67■□□□□ 0.26
TRIM47-201ENST00000254816 KCNJ15Q99712 375 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 MGAQ8IWI9 3026 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 ARL6IP5O75915 188 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 SYNGR4O95473 234 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 FAM157BP0CG42 384 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 RAB3BP20337 219 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 TALDO1P37837 337 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 KCNMB1Q16558 191 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 TMEM53Q6P2H8 277 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 LINGO2Q7L985 606 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 OR5H6Q8NGV6 325 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 NABP1Q96AH0 204 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 RCE1Q9Y256 329 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 AK6Q9Y3D8 172 aaKnown RBP16.67■□□□□ 0.26
TRIM47-201ENST00000254816 R4GMQ9 66 aa16.67■□□□□ 0.26
TRIM47-201ENST00000254816 TRAV17A0A0B4J275 112 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 DLL1O00548 723 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 ACTL6AO96019 429 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 CD83Q01151 205 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 Q499Y3 187 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 SLC7A5P1Q8MH63 180 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 INTS12Q96CB8 462 aaKnown RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 KCTD12Q96CX2 325 aaKnown RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 PRRG4Q9BZD6 226 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 NELFAQ9H3P2 528 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 CRLF2Q9HC73 371 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 ALG5Q9Y673 324 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 PRRC2CQ9Y520 2896 aaKnown RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 TRBV5-5A0A0J9YX44 114 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 TMEM269A0A1B0GVZ9 245 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 IGHV3-9P01782 118 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 SNRPBP14678 240 aaKnown RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 ZNF24P17028 368 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 SRMP19623 302 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 GUCA1AP43080 201 aaPredicted RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 RNASE12Q5GAN4 147 aaKnown RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 TUSC5Q8IXB3 177 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 SNIP1Q8TAD8 396 aaKnown RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 ZC3HAV1LQ96H79 300 aaKnown RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 G6PC2Q9NQR9 355 aa16.66■□□□□ 0.26
TRIM47-201ENST00000254816 MCTS1Q9ULC4 181 aaKnown RBP16.66■□□□□ 0.26
TRIM47-201ENST00000254816 TRAV1-2A0A0B4J238 106 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 ZNF254O75437 659 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms