RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 XRCC3O43542 346 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 HSD11B1P28845 292 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 GUCA1AP43080 201 aaPredicted RBP26.27■■□□□ 1.8
PABPN1-201ENST00000216727 POU3F4P49335 361 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 TBRG1Q3YBR2 411 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 GLRX5Q86SX6 157 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 BOKQ9UMX3 212 aaPredicted RBP26.27■■□□□ 1.8
PABPN1-201ENST00000216727 DOK2O60496 412 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 KRT33AO76009 404 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 NEURL1O76050 574 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 CASRP41180 1078 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 CARD18P57730 90 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 TAS2R20P59543 309 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 PHYHD1Q5SRE7 291 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 ATAD3CQ5T2N8 411 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 SPINK14Q6IE38 97 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 PIP4P1Q86T03 277 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 OR52I2Q8NH67 350 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 FCAMRQ8WWV6 532 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 SLC25A28Q96A46 364 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 ADGRG7Q96K78 797 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 NELFAQ9H3P2 528 aa26.27■■□□□ 1.8
PABPN1-201ENST00000216727 PHF3Q92576 2039 aaKnown RBP26.26■■□□□ 1.79
PABPN1-201ENST00000216727 PINLYPA6NC86 204 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 IQCJ-SCHIP1C9J366 451 aaPredicted RBP26.26■■□□□ 1.79
PABPN1-201ENST00000216727 RER1O15258 196 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 ECDO95905 644 aaPredicted RBP26.26■■□□□ 1.79
PABPN1-201ENST00000216727 MSR1P21757 451 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 C2orf76Q3KRA6 126 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 ABI3Q9P2A4 366 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 NCKAP5O14513 1909 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 GLSO94925 669 aaPredicted RBP26.26■■□□□ 1.79
PABPN1-201ENST00000216727 WDPCPO95876 746 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 PLA2G7Q13093 441 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 CBX3Q13185 183 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 TAF13Q15543 124 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 DNM1P46Q6ZS02 220 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 NKAIN3Q8N8D7 197 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 OR6M1Q8NGM8 313 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 ZNF416Q9BWM5 594 aa26.26■■□□□ 1.79
PABPN1-201ENST00000216727 LOC390937A0A1W2PQ73 354 aa26.25■■□□□ 1.79
PABPN1-201ENST00000216727 ACOT7O00154 380 aa26.25■■□□□ 1.79
PABPN1-201ENST00000216727 TRAPPC6AO75865 159 aa26.25■■□□□ 1.79
PABPN1-201ENST00000216727 GDF1P27539 372 aa26.25■■□□□ 1.79
PABPN1-201ENST00000216727 NUBP1P53384 320 aa26.25■■□□□ 1.79
PABPN1-201ENST00000216727 SNTB2Q13425 540 aaKnown RBP26.25■■□□□ 1.79
PABPN1-201ENST00000216727 WIPI1Q5MNZ9 446 aaPredicted RBP26.25■■□□□ 1.79
PABPN1-201ENST00000216727 MTFR2Q6P444 385 aa26.25■■□□□ 1.79
PABPN1-201ENST00000216727 FAM173AQ9BQD7 235 aa26.25■■□□□ 1.79
PABPN1-201ENST00000216727 UTP23Q9BRU9 249 aaKnown RBP26.25■■□□□ 1.79
PABPN1-201ENST00000216727 NUBP2Q9Y5Y2 271 aa26.25■■□□□ 1.79
PABPN1-201ENST00000216727 DHHO43323 396 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 SYT7O43581 403 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 CTAG2O75638 210 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 TMIGD3P0DMS9 266 aaPredicted RBP26.24■■□□□ 1.79
PABPN1-201ENST00000216727 ARSBP15848 533 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 HTR2CP28335 458 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 SELENOPP49908 381 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 AP3S2P59780 193 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 GRB2P62993 217 aaKnown RBP26.24■■□□□ 1.79
PABPN1-201ENST00000216727 AIMP2Q13155 320 aaKnown RBP26.24■■□□□ 1.79
PABPN1-201ENST00000216727 CSRP2Q16527 193 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 C20orf196Q8IYI0 205 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 OR51A2Q8NGJ7 313 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 LINC01387J3KSC0 135 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 F10P00742 488 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 CTSSP25774 331 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 GFRA1P56159 465 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 SGCAQ16586 387 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 LUZP2Q86TE4 346 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 LYPD6Q86Y78 171 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 OR2V1Q8NHB1 315 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 IL17BQ9UHF5 180 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 RCE1Q9Y256 329 aa26.24■■□□□ 1.79
PABPN1-201ENST00000216727 LMX1BO60663 402 aa26.23■■□□□ 1.79
PABPN1-201ENST00000216727 TCRBP04435 133 aa26.23■■□□□ 1.79
PABPN1-201ENST00000216727 C1orf100Q5SVJ3 147 aa26.23■■□□□ 1.79
PABPN1-201ENST00000216727 GLYATL3Q5SZD4 288 aa26.23■■□□□ 1.79
PABPN1-201ENST00000216727 SLC39A7Q92504 469 aa26.23■■□□□ 1.79
PABPN1-201ENST00000216727 GCDHQ92947 438 aaPredicted RBP26.23■■□□□ 1.79
PABPN1-201ENST00000216727 NABP1Q96AH0 204 aa26.23■■□□□ 1.79
PABPN1-201ENST00000216727 FOXRED1Q96CU9 486 aaPredicted RBP26.23■■□□□ 1.79
PABPN1-201ENST00000216727 DIABLOQ9NR28 239 aa26.23■■□□□ 1.79
PABPN1-201ENST00000216727 ITGA3P26006 1051 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 EFNB2P52799 333 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 OR2M7Q8NG81 312 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 FGGYQ96C11 551 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 CACNG6Q9BXT2 260 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 FLVCR1Q9Y5Y0 555 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 A0A1B0GTI1 187 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 GGT3PA6NGU5 568 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 POU3F2P20265 443 aaPredicted RBP26.22■■□□□ 1.79
PABPN1-201ENST00000216727 GIFP27352 417 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 SPOCK1Q08629 439 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 KCNJ8Q15842 424 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 GJC3Q8NFK1 279 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 SIGLEC12Q96PQ1 595 aa26.22■■□□□ 1.79
PABPN1-201ENST00000216727 TMEM272A0A1B0GTI8 110 aa26.21■■□□□ 1.79
PABPN1-201ENST00000216727 A0A1B0GVI7 797 aa26.21■■□□□ 1.79
PABPN1-201ENST00000216727 ZNF716A6NP11 495 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms