RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm12666A2AMD0 254 aaKnown RBP18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Rasd1O35626 280 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Hprt1P00493 218 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Bmp8bP55105 399 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Rac3P60764 192 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Parp8Q3UD82 852 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tmem253Q3UNB8 204 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Sgk494Q5SYL1 278 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Lrrn1Q61809 716 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Pan3Q640Q5 837 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Hist2h2abQ64522 130 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1287Q7TQY1 305 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1281Q7TQY6 305 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr506Q7TRU6 314 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Cdc123Q8CII2 336 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Snrnp27Q8K194 155 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Mnd1Q8K396 205 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Prmt3Q922H1 532 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tmed9Q99KF1 235 aaKnown RBP18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 LhppQ9D7I5 270 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 PacrgQ9DAK2 241 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Acss2Q9QXG4 701 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Dgat1Q9Z2A7 498 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Cfap46E9Q2C0 2641 aa18.87■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 RttnQ8R4Y8 2226 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Smim17A0A504 109 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1040A2ARY1 313 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Calhm1D3Z291 348 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 PitpnaP53810 271 aaKnown RBP18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 G6pd2P97324 513 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 CxadrP97792 365 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 TiprlQ8BH58 271 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Mboat1Q8BH98 492 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Crispld2Q8BZQ2 495 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Fam110aQ8R184 296 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tmem234Q8R1E7 140 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Pafah2Q8VDG7 390 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1163Q8VFR4 316 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Actl11Q9D5V1 1207 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tex47Q9D5W8 253 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Dctn3Q9Z0Y1 186 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Gm21897J3KMP5 500 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Raet1aO08602 253 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Raet1bO08603 253 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Rnase2bO35292 155 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Cox4i1P19783 169 aaKnown RBP18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Scn1bP97952 218 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 MpgQ04841 333 aaKnown RBP18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Klhdc2Q4G5Y1 406 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Slc6a7Q6PGE7 637 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Camk2dQ6PHZ2 499 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Slc34a3Q80SU6 601 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Lrfn4Q80XU8 636 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Spem2Q8C5U4 503 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Peli1Q8C669 418 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Utp15Q8C7V3 528 aaKnown RBP18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Cela3bQ9CQ52 269 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 TrirQ9D735 173 aa18.86■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1082A0A1L1SUC9 313 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tanc2A2A690 1994 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Zfp648D3Z0W3 525 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 C3ar1O09047 477 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 SgcdP82347 289 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 LvrnQ2KHK3 559 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Pdss2Q33DR3 401 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1463Q7TQR3 310 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tbl1xr1Q8BHJ5 514 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Sco2Q8VCL2 255 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Asb15Q8VHS6 583 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Slc39a8Q91W10 462 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Exosc5Q9CRA8 235 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Icam4Q9ERM2 262 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Arl6ip1Q9JKW0 203 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Khdrbs3Q9R226 346 aaKnown RBP18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Kcnj16Q9Z307 419 aa18.85■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1493-ps1A0A140LHU2 316 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Aadacl3A2A7Z8 408 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1029A2ATE0 324 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Mllt6B1AR10 1109 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Prss56F2YMG0 604 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 TpbpaP13438 124 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 CalrP14211 416 aaKnown RBP18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Irf1P15314 329 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Cd40lgP27548 260 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Alox5apP30355 161 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Capza1P47753 286 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tbr1Q64336 681 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Rps27Q6ZWU9 84 aaKnown RBP18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1028Q7TR89 324 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr201Q7TS38 308 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Nudt15Q8BG93 170 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 FkrpQ8CG64 494 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 HinfpQ8K1K9 503 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Crtac1Q8R555 646 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1443Q8VFW8 312 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr646Q8VGW2 312 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 DnlzQ9D113 177 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Ppp1r35Q9D8C8 260 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Keg1Q9DCY0 295 aa18.84■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 SpenQ62504 3644 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms