RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Fxyd2Q04646 70 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Gpr15Q0VDU3 360 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 4930480E11RikQ0VG34 394 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Slc7a15Q50E62 488 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Cypt4Q6P925 153 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Chil6Q80W26 440 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Calhm5Q8R100 309 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Ubac2Q8R1K1 345 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Mitd1Q8VDV8 249 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Ccdc71Q8VEG0 433 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Rab31Q921E2 194 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Rtl8bQ9D1F0 113 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Tmem27Q9ESG4 222 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Akap11E9Q777 1895 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Cacna1sQ02789 1880 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 4931429L15RikE9PVU2 379 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Tacr3P47937 452 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Cdk5r1P61809 307 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Smim15Q3UTD9 74 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Ltbp1Q8CG19 1712 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Rap1bQ99JI6 184 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Elovl7Q9D2Y9 281 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Dtd1Q9DD18 209 aaKnown RBP9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r65Q9EPS7 332 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Jag2Q9QYE5 1247 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Ccr9Q9WUT7 369 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 Pmm2Q9Z2M7 242 aa9.45□□□□□ -0.9
Lig4-201ENSMUST00000095476 EvplQ9D952 2035 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 EdaO54693 391 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Il13P20109 131 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Tacr1P30548 407 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Plpp4Q0VBU9 271 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Acsf3Q3URE1 583 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 NarflQ7TMW6 476 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Ell3Q80VR2 395 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Cnot4Q8BT14 575 aaKnown RBP9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Nadk2Q8C5H8 452 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Commd9Q8K2Q0 198 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Commd5Q8R395 224 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Olfr229Q8VFN5 307 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Olfr790Q8VGJ3 322 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Cdca3Q99M54 266 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Hrasls5Q9CPX5 270 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Cldn12Q9ET43 244 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Scnn1gQ9WU39 655 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Tnrc6cQ3UHC0 1690 aaKnown RBP9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Ctxnd2A0A1B0GQX3 59 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Ndor1A2AI05 598 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Olfr1496B9EHG2 317 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r137D3YTY1 307 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Gm8225D3Z536 292 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r143E9PUW9 307 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r157E9Q069 297 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r139E9Q8L6 297 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r112G3UY48 297 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r135K9J7G0 307 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Gm4141K9J7H2 306 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r125L7N227 307 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r116L7N2A6 307 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Fut1O09160 376 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Hoxb1P17919 297 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Rpl12P35979 165 aaKnown RBP9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 IhhP97812 411 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Tmem38aQ3TMP8 298 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Gpr62Q80UC6 358 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Mfsd11Q8BJ51 449 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Cdadc1Q8BMD5 523 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Sertm1Q8CD78 107 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Fbxw17Q8CFE8 466 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Hus1bQ8K572 276 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Cd207Q8VBX4 331 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Olfr837Q8VFJ4 312 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Bbox1Q924Y0 387 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Slc33a1Q99J27 550 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Csnk1dQ9DC28 415 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r100Q9EPS5 307 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Trex2Q9R1A9 236 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Mecp2Q9Z2D6 484 aaKnown RBP9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Olfr1432A0A140LHS7 346 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 SvaE9PX96 165 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Susd1E9Q3H4 752 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Olfr69E9Q7C5 316 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Kcnmb3E9Q7U0 239 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Gm21761J3QK00 171 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 5730507C01RikJ3QPX0 416 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Prl8a2O54832 240 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Dnmt3bO88509 859 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 IghmP01872 454 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 C4bpaP08607 469 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Wnt6P22727 364 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Gja4P28235 333 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Stfa1P35175 97 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Map2k6P70236 334 aaKnown RBP9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Hoxb13P70321 286 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Tmem64Q3U145 381 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 AbraclQ4KML4 81 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Klri2Q5DT36 248 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 SrmQ64674 302 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 Fpr-rs7Q71MR7 338 aa9.44□□□□□ -0.9
Lig4-201ENSMUST00000095476 P2ry10bQ8BY68 352 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms