RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	RIN1	Q13671	783 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	MEP1B	Q16820	701 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	KRTAP21-3	Q3LHN1	58 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	CCDC92	Q53HC0	331 aa	Predicted RBP	12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	ELFN2	Q5R3F8	820 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	MBNL2	Q5VZF2	373 aa	Known RBP	12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	GJC3	Q8NFK1	279 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	OR8D4	Q8NGM9	314 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	OR1F12	Q8NHA8	337 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	FN3K	Q9H479	309 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	TBC1D23	Q9NUY8	699 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	TBCCD1	Q9NVR7	557 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	ATPIF1	Q9UII2	106 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	LHFPL6	Q9Y693	200 aa		12.85	□□□□□ -0.35
PHGDH-231	ENST00000641939	GNGT2	O14610	69 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	RER1	O15258	196 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	IGHV4-31	P0DP07	118 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	TEK	Q02763	1124 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	DBP	Q10586	325 aa	Predicted RBP	12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	BNIP1	Q12981	228 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	PCGF3	Q3KNV8	242 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	SLC36A3	Q495N2	470 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	C6orf52	Q5T4I8	152 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	CYB5R2	Q6BCY4	276 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	SPATA24	Q86W54	205 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	LNX2	Q8N448	690 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	SLC26A10	Q8NG04	563 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	OR10G2	Q8NGC3	310 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	GIPC3	Q8TF64	312 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	IPCEF1	Q8WWN9	437 aa	Predicted RBP	12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	SLC7A6	Q92536	515 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	RDH5	Q92781	318 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	TSSK6	Q9BXA6	273 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	NKIRAS2	Q9NYR9	191 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	BAIAP2	Q9UQB8	552 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	POMP	Q9Y244	141 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	GRIP1	Q9Y3R0	1128 aa		12.84	□□□□□ -0.35
PHGDH-231	ENST00000641939	ARRDC5	A6NEK1	342 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939		A8MV72	311 aa	Predicted RBP	12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	GSC2	O15499	205 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	NCR1	O76036	304 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	SOX14	O95416	240 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	TF	P02787	698 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	TACSTD2	P09758	323 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNF23	P17027	643 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	ACHE	P22303	614 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	TUBG1	P23258	451 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	COL8A2	P25067	703 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	MAGEB1	P43366	347 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	GZMK	P49863	264 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNF81	P51508	661 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	HIST1H3A	P68431	136 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	MRPS11	P82912	194 aa	Known RBP	12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	COX10	Q12887	443 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	TMEM255A	Q5JRV8	349 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	HIST2H3PS2	Q5TEC6	136 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	CORO6	Q6QEF8	472 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	CD300LD	Q6UXZ3	194 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	HIST2H3A	Q71DI3	136 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	CYB561A3	Q8NBI2	242 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	OR2T33	Q8NG76	320 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	GTF3A	Q92664	365 aa	Known RBP	12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	DCLRE1C	Q96SD1	692 aa	Known RBP	12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	DDO	Q99489	341 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	FEV	Q99581	238 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	NIPSNAP1	Q9BPW8	284 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	CADM1	Q9BY67	442 aa	Known RBP	12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	HDHD2	Q9H0R4	259 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	YY1AP1	Q9H869	796 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	CHODL	Q9H9P2	273 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	TUBG2	Q9NRH3	451 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	ARMC1	Q9NVT9	282 aa		12.83	□□□□□ -0.36
PHGDH-231	ENST00000641939	TCRBV3S1	A0A5B6	114 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	PLSCR5	A0PG75	271 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	CRLF1	O75462	422 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	HLA-DQA2	P01906	255 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	LIPA	P38571	399 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	RASSF2	P50749	326 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	MMP15	P51511	669 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	CHN2	P52757	468 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	CCL8	P80075	99 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNF362	Q5T0B9	420 aa	Predicted RBP	12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	TMEM179B	Q7Z7N9	219 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	LINC00346	Q8IVM7	164 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	PROKR2	Q8NFJ6	384 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	OR2T4	Q8NH00	348 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	OR4Q3	Q8NH05	313 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	YIPF5	Q969M3	257 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	COG8	Q96MW5	612 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	COQ7	Q99807	217 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	CDADC1	Q9BWV3	514 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	POFUT1	Q9H488	388 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	CYSLTR2	Q9NS75	346 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	DECR2	Q9NUI1	292 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	CYB5R1	Q9UHQ9	305 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	KLHL21	Q9UJP4	597 aa		12.82	□□□□□ -0.36
PHGDH-231	ENST00000641939	TANC2	Q9HCD6	1990 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	LRP5L	A4QPB2	252 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms