RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LGI3Q8N145 548 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 PRELID2Q8N945 189 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 CT45A3Q8NHU0 189 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 GALNT14Q96FL9 552 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 PANX1Q96RD7 426 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 C20orf24Q9BUV8 137 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 FAM192AQ9GZU8 254 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 EXO5Q9H790 373 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 GEMIN7Q9H840 131 aaKnown RBP2.14□□□□□ -2.07
CCDC7-216ENST00000640058 HRASLS2Q9NWW9 162 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 ZNRD1Q9P1U0 126 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 ST3GAL6Q9Y274 331 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 COL22A1Q8NFW1 1626 aaPredicted RBP2.13□□□□□ -2.07
CCDC7-216ENST00000640058 TUBGCP6Q96RT7 1819 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 K7EMT4 169 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 AIM2O14862 343 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 CACNG3O60359 315 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 EIF4E2O60573 245 aaKnown RBP2.13□□□□□ -2.07
CCDC7-216ENST00000640058 SERPINE2P07093 398 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 CALM1P0DP23 149 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 CALM2P0DP24 149 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 CALM3P0DP25 149 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 CCNB1P14635 433 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 ZNF250P15622 560 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 DCKP27707 260 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 MAS1LP35410 378 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 CYB561P49447 251 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 RAB9AP51151 201 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 C21orf59P57076 290 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 ESRRGP62508 458 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 GBE1Q04446 702 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 LIPEQ05469 1076 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 TWF1Q12792 350 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 PON2Q15165 354 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 RCN1Q15293 331 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 SOHLH1Q5JUK2 328 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 PPM1LQ5SGD2 360 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 BZW1Q7L1Q6 419 aaKnown RBP2.13□□□□□ -2.07
CCDC7-216ENST00000640058 OR5B3Q8NH48 314 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 C8orf44Q96CB5 159 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 NEURL3Q96EH8 262 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 LZTS2Q9BRK4 669 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 SAV1Q9H4B6 383 aaPredicted RBP2.13□□□□□ -2.07
CCDC7-216ENST00000640058 UBE2ZQ9H832 354 aaPredicted RBP2.13□□□□□ -2.07
CCDC7-216ENST00000640058 VPS37BQ9H9H4 285 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 C12orf10Q9HB07 376 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 UXTQ9UBK9 157 aaPredicted RBP2.13□□□□□ -2.07
CCDC7-216ENST00000640058 ZNF229Q9UJW7 825 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 SLC17A4Q9Y2C5 497 aa2.13□□□□□ -2.07
CCDC7-216ENST00000640058 CAMTA1Q9Y6Y1 1673 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 INSRP06213 1382 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 IGLV1-36A0A0B4J1U3 117 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 LYRM9A8MSI8 78 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 ACSM4P0C7M7 580 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 OR5H8P0DN80 308 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 SFTPCP11686 197 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 GALP22466 123 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 F2RP25116 425 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 STOMP27105 288 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 CDKN2BP42772 138 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 SYKP43405 635 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 CX3CR1P49238 355 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 MRPL19P49406 292 aaKnown RBP2.12□□□□□ -2.07
CCDC7-216ENST00000640058 CRISP1P54107 249 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 RGS8P57771 180 aaPredicted RBP2.12□□□□□ -2.07
CCDC7-216ENST00000640058 PRR3P79522 188 aaKnown RBP2.12□□□□□ -2.07
CCDC7-216ENST00000640058 CCNJQ5T5M9 372 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 UBE2UQ5VVX9 321 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 FBXW12Q6X9E4 464 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 CENPQQ7L2Z9 268 aaPredicted RBP2.12□□□□□ -2.07
CCDC7-216ENST00000640058 TMEM150AQ86TG1 271 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 WDR86Q86TI4 376 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 OAFQ86UD1 273 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 PQLC3Q8N755 202 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 OR52K2Q8NGK3 314 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 MRGPRFQ96AM1 343 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 L3HYPDHQ96EM0 354 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 ZNF681Q96N22 645 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 ANKRD60Q9BZ19 345 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 LYARQ9NX58 379 aaKnown RBP2.12□□□□□ -2.07
CCDC7-216ENST00000640058 CCDC59Q9P031 241 aaKnown RBP2.12□□□□□ -2.07
CCDC7-216ENST00000640058 GCNT4Q9P109 453 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 TMEM14AQ9Y6G1 99 aa2.12□□□□□ -2.07
CCDC7-216ENST00000640058 IGHV5-10-1A0A0J9YXX1 117 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 RAD51BO15315 384 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 NUPL2O15504 423 aaKnown RBP2.11□□□□□ -2.07
CCDC7-216ENST00000640058 CLDN11O75508 207 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 CCNKO75909 580 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 TPM2P07951 284 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 FGF4P08620 206 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 IGHV1-8P0DP01 117 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 RAB3BP20337 219 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 CSNK1EP49674 416 aaKnown RBP2.11□□□□□ -2.07
CCDC7-216ENST00000640058 RND2P52198 227 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 PITPNAQ00169 270 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 SP4Q02446 784 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 MERTKQ12866 999 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 ERCC8Q13216 396 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 MAB21L1Q13394 359 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 ZSCAN26Q16670 478 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms