RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 COX6CP09669 75 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 ZFP62Q8NB50 900 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 PLIN4Q96Q06 1357 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF814B7Z6K7 855 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 CPMP14384 443 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 SMPD1P17405 629 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 Q6ZN92 141 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 PTRH2Q9Y3E5 179 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 SLC5A10A0PJK1 596 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 RAD52P43351 418 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 LSMEM1Q8N8F7 131 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 PRSS3P2Q8NHM4 247 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 NDUFB7P17568 137 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 CLLU1Q5K131 121 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 CARFQ8N187 725 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 DYRK2Q92630 601 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 NXPE3Q969Y0 559 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 SEBOXQ9HB31 216 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 OR2T8A6NH00 312 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 PAPLNO95428 1278 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 ALPLP05186 524 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 GYPBP06028 91 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 PTHLHP12272 177 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 DCAF12Q5T6F0 453 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 APOBEC3GQ9HC16 384 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 CASP8AP2Q9UKL3 1982 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF354AO60765 605 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 NOVA1P51513 510 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 PMS2P11Q13670 270 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 SLC35G1Q2M3R5 365 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 ADGRG7Q96K78 797 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 GSTO2Q9H4Y5 243 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 ELNP15502 786 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 P2RX3P56373 397 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 SPANXN5Q5MJ07 72 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 CMTM4Q8IZR5 234 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 GOT1L1Q8NHS2 421 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 CCDC187A0A096LP49 1063 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 LILRB1Q8NHL6 650 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 RAB24Q969Q5 203 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 HPP00738 406 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 HAPLN1P10915 354 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 PJVKQ0ZLH3 352 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF761Q86XN6 746 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF280AP59817 542 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 RNF225M0QZC1 329 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 FZD6O60353 706 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 C17orf78Q8N4C9 275 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 MMP26Q9NRE1 261 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 CPEP16870 476 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 ITGB7P26010 798 aa17.8■□□□□ 0.44
CACNA1A-257ENST00000638009 RGPD2P0DJD1 1756 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 DUS4LO95620 317 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 CD37P11049 281 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF140P52738 457 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 SYT9Q86SS6 491 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 KCND3Q9UK17 655 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 PCBP4P57723 403 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 MANEAQ5SRI9 462 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 MUC15Q8N387 334 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 ISG20Q96AZ6 181 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 FER1L6-AS2Q96M78 137 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 H0YIV9 168 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 FAM87AP0C7U9 286 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF429Q86V71 674 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 OR52N1Q8NH53 320 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 TTC9Q92623 222 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 SYT17Q9BSW7 474 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 A0A0G2JLL6 359 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 LIMS3P0CW19 117 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 LIMS4P0CW20 117 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 ASAH1Q13510 395 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 PRRT2Q7Z6L0 340 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 HMGN2P46Q86SG4 172 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 AMIGO3Q86WK7 504 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 MS4A18H0YCH9 400 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 RPL12P30050 165 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 MS4A18Q3C1V0 323 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF528Q3MIS6 628 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 CYHR1Q6ZMK1 362 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 C11orf40Q8WZ69 217 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 COCHO43405 550 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 SRSF9Q13242 221 aaKnown RBP eCLIP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 WDR74Q6RFH5 385 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 C6orf201Q7Z4U5 140 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 TSACCQ96A04 125 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 GPR173Q9NS66 373 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 P4HTMQ9NXG6 502 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 TNFRSF1BP20333 461 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 ZP3P21754 424 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 SNRPGP62308 76 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 GALMQ96C23 342 aa17.79■□□□□ 0.44
CACNA1A-257ENST00000638009 FCGR2CP31995 323 aa17.78■□□□□ 0.44
CACNA1A-257ENST00000638009 LMAN2Q12907 356 aa17.78■□□□□ 0.44
CACNA1A-257ENST00000638009 DOK3Q7L591 496 aa17.78■□□□□ 0.44
CACNA1A-257ENST00000638009 TMEM230Q96A57 120 aa17.78■□□□□ 0.44
CACNA1A-257ENST00000638009 OR4C12Q96R67 309 aa17.78■□□□□ 0.44
CACNA1A-257ENST00000638009 PLCE1Q9P212 2302 aa17.78■□□□□ 0.44
CACNA1A-257ENST00000638009 IL5P05113 134 aa17.78■□□□□ 0.44
CACNA1A-257ENST00000638009 CD99P14209 185 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms