RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 TEX19Q8NA77 164 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 OR5M9Q8NGP3 310 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 MAP6Q96JE9 813 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 DACH2Q96NX9 599 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 ALKBH3Q96Q83 286 aaPredicted RBP6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 FOXB1Q99853 325 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 ZNF416Q9BWM5 594 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 RNF167Q9H6Y7 350 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 MOB1AQ9H8S9 216 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 SLC7A10Q9NS82 523 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 FRRS1LQ9P0K9 344 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 CLEC4AQ9UMR7 237 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 EMC9Q9Y3B6 208 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 A3GALT2U3KPV4 340 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 CEP295Q9C0D2 2601 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 IGF2RP11717 2491 aa6.64□□□□□ -1.35
PTP4A1-206ENST00000627002 TRAV1-2A0A0B4J238 106 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 TMEM269A0A1B0GVZ9 245 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ACOD1A6NK06 481 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 FIGNL2A6NMB9 653 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 OR4C45A6NMZ5 311 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 LOC110117498-PIK3R3F6TDL0 507 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 CASKO14936 926 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 RER1O15258 196 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 SRSF10O75494 262 aaKnown RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 CDRT1O95170 752 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 CNOT4O95628 575 aaKnown RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 APOC1P02654 83 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 CRHP06850 196 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 UCHL1P09936 223 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 FAM87AP0C7U9 286 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 CTSSP25774 331 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 OR3A2P47893 321 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 MMP16P51512 607 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 GUCA2AQ02747 115 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 SCRN3Q0VDG4 424 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ECH1Q13011 328 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 RAB35Q15286 201 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 EIF2S3LQ2VIR3 472 aaKnown RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 LINC00303Q3SY05 128 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ZNF404Q494X3 552 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ZMAT1Q5H9K5 638 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 WDR38Q5JTN6 314 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ELFN2Q5R3F8 820 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 BCL2L15Q5TBC7 163 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 FBXW9Q5XUX1 488 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ZFYVE26Q68DK2 2539 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ZNF585AQ6P3V2 769 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 PLXDC2Q6UX71 529 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 UNQ9370/PRO34162Q6UXP9 181 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 EML6Q6ZMW3 1958 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ZNF704Q6ZNC4 412 aaPredicted RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 FAM214BQ7L5A3 538 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ZNF627Q7L945 461 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 LINGO2Q7L985 606 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 NUFIP2Q7Z417 695 aaKnown RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 FGD2Q7Z6J4 655 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 DPPA2Q7Z7J5 298 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 CROCCP3Q8IVE0 287 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 UBE2J2Q8N2K1 259 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 PRSS35Q8N3Z0 413 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 LRRC18Q8N456 261 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 OR10S1Q8NGN2 331 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 MCFD2Q8NI22 146 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 GPR148Q8TDV2 347 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 HSD17B8Q92506 261 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 SLC25A46Q96AG3 418 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ZNF837Q96EG3 531 aaPredicted RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ATF6BQ99941 703 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 PDCD1LG2Q9BQ51 273 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 SLIRPQ9GZT3 109 aaKnown RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 HDHD2Q9H0R4 259 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 MMP27Q9H306 513 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 PNRC2Q9NPJ4 139 aaKnown RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 ZNF71Q9NQZ8 489 aaPredicted RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 SNTG1Q9NSN8 517 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 DDX28Q9NUL7 540 aaKnown RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 CRNNQ9UBG3 495 aaPredicted RBP6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 MALT1Q9UDY8 824 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 OR52A1Q9UKL2 312 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 GTF2A1LQ9UNN4 478 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 TIMM10BQ9Y5J6 103 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 FRYQ5TBA9 3013 aa6.63□□□□□ -1.35
PTP4A1-206ENST00000627002 MED13Q9UHV7 2174 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 NCKAP5O14513 1909 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 A0A075B6Q4 140 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 TRBV5-5A0A0J9YX44 114 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 MBD3L4A6NDZ8 208 aaPredicted RBP6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 MBD3L3A6NE82 208 aaPredicted RBP6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 MBD3L5A6NJ08 208 aaPredicted RBP6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 ATXN7O15265 892 aaPredicted RBP6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 WISP2O76076 250 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 WNT11O96014 354 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 PNPP00491 289 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 RAF1P04049 648 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 PRB1P04280 392 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 ISG15P05161 165 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 OCM2P0CE71 109 aa6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 UBCP0CG48 685 aaKnown RBP6.62□□□□□ -1.35
PTP4A1-206ENST00000627002 SFTPCP11686 197 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms