RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PSMB5P28074 263 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 PRAMEF8Q5VWM4 474 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 PRAMEF9Q5VWM5 478 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 PRAMEF7Q5VXH5 474 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 SLC16A11Q8NCK7 471 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 OR2AJ1Q8NGZ0 328 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 DYRK2Q92630 601 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 EDAQ92838 391 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 ZNF689Q96CS4 500 aaPredicted RBP12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 Q96M85 177 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 SLC5A7Q9GZV3 580 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 PDE7BQ9NP56 450 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 MBD1Q9UIS9 605 aaPredicted RBP12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 CACNA1DQ01668 2161 aa12.33□□□□□ -0.44
PPP4R3B-205ENST00000616288 ZNF638Q14966 1978 aaKnown RBP12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 H7BYZ3 331 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 TRHRP34981 398 aaPredicted RBP12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 ZNF280AP59817 542 aaPredicted RBP12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 CD81P60033 236 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 DHODHQ02127 395 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 OR5AR1Q8NGP9 310 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 PCBD2Q9H0N5 130 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 CTAG2O75638 210 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 SLC35G6P0C7Q6 338 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 ALOX5APP20292 161 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 HTR5AP47898 357 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 ZNF136P52737 540 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 NUTF2P61970 127 aaKnown RBP12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 PMPCAQ10713 525 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 SLC25A30Q5SVS4 291 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 SLC17A9Q9BYT1 436 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 SUSD2Q9UGT4 822 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 WNT11O96014 354 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 NPPBP16860 134 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 SLC35A1P78382 337 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 CD300LDQ6UXZ3 194 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 SYS1Q8N2H4 156 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 NMNAT2Q9BZQ4 307 aa12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 MRPS18AQ9NVS2 196 aaKnown RBP12.32□□□□□ -0.44
PPP4R3B-205ENST00000616288 STC2O76061 302 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 TESK1Q15569 626 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 LSRQ86X29 649 aaPredicted RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 MORN4Q8NDC4 146 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 C22orf15Q8WYQ4 148 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 MS4A10Q96PG2 267 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 URM1Q9BTM9 101 aaKnown RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 C1orf123Q9NWV4 160 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 PAM16Q9Y3D7 125 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 COL18A1P39060 1754 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 RP1P56715 2156 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 TMEM212A6NML5 194 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 A6NNC1 897 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 CEBPZOSA8MTT3 80 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 CSTAP01040 98 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 IGLV3-25P01717 112 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 LRG1P02750 347 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 RPS12P25398 132 aaKnown RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 LIMS1P48059 325 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 HERV-K104P61576 105 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 DLK1P80370 383 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 ZNF85Q03923 595 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 NKAIN1Q4KMZ8 207 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 SLC22A6Q4U2R8 563 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 GFI1BQ5VTD9 330 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 USP50Q70EL3 339 aaPredicted RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 OOSP2Q86WS3 158 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 FIBINQ8TAL6 211 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 RBM18Q96H35 190 aaKnown RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 C2orf50Q96LR7 162 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 MRPL37Q9BZE1 423 aaKnown RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 RBPJLQ9UBG7 517 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 KCNE3Q9Y6H6 103 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 CCL15-CCL14A0A0B4J2E2 113 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 M0QZK8 103 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 GPR137BO60478 399 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 GGCTO75223 188 aaKnown RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 C1QL1O75973 258 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 PGA4P0DJD7 388 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 PGA5P0DJD9 388 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 SLC25A4P12235 298 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 CD96P40200 585 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 GPR18Q14330 331 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 CCL15Q16663 113 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 RTL6Q6ICC9 239 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 BAGE3Q86Y29 109 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 BAGE2Q86Y30 109 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 NPAS4Q8IUM7 802 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 CBARPQ8N350 705 aaPredicted RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 ZNF709Q8N972 641 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 INSM2Q96T92 566 aaPredicted RBP12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 NDUFAF3Q9BU61 184 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 ADGRL4Q9HBW9 690 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 LHX3Q9UBR4 397 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 IL36AQ9UHA7 158 aa12.31□□□□□ -0.44
PPP4R3B-205ENST00000616288 MMACHCQ9Y4U1 282 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms