RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 PGCP20142 388 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 THBS2P35442 1172 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 GAS1P54826 345 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 BIDP55957 195 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 MFSD13AQ14CX5 517 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 PDSS1Q5T2R2 415 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 PAPD4Q6PIY7 484 aaKnown RBP8.66□□□□□ -1.02
TPM1-233ENST00000610733 SLC16A9Q7RTY1 509 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 FJX1Q86VR8 437 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 ZNF565Q8N9K5 539 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 KISS1RQ969F8 398 aaPredicted RBP8.66□□□□□ -1.02
TPM1-233ENST00000610733 PIGTQ969N2 578 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 MIB2Q96AX9 1013 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 KLHL13Q9P2N7 655 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 FAM230AA0A1W2PPH8 454 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 ADAP1O75689 374 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 GLAP06280 429 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 CD1CP29017 333 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 SERPINF1P36955 418 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 RBMXP38159 391 aaKnown RBP8.66□□□□□ -1.02
TPM1-233ENST00000610733 RGS19P49795 217 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 C21orf62-AS1Q17RA5 79 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 TMEM240Q5SV17 173 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 OR4K15Q8NH41 348 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 OR51E1Q8TCB6 317 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 ZC3HAV1LQ96H79 300 aaKnown RBP8.66□□□□□ -1.02
TPM1-233ENST00000610733 PGAM5Q96HS1 289 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 EVA1AQ9H8M9 152 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 EHFQ9NZC4 300 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 SHANK1Q9Y566 2161 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 NDUFB6O95139 128 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 RPA2P15927 270 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 CTLA4P16410 223 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 ABOP16442 354 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 ADRA2CP18825 462 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 BLKP51451 505 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 RASGEF1BQ0VAM2 473 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 PHF19Q5T6S3 580 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 RNLSQ5VYX0 342 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 CPEB2Q7Z5Q1 589 aaKnown RBP8.66□□□□□ -1.02
TPM1-233ENST00000610733 HSD17B11Q8NBQ5 300 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 BPIFCQ8NFQ6 507 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 OR14A16Q8NHC5 309 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 BAHD1Q8TBE0 780 aaPredicted RBP8.66□□□□□ -1.02
TPM1-233ENST00000610733 ROBO4Q8WZ75 1007 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 CCDC74AQ96AQ1 378 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 BMFQ96LC9 184 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 SLC17A4Q9Y2C5 497 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 URGCP-MRPS24S4R325 110 aa8.66□□□□□ -1.02
TPM1-233ENST00000610733 LOC100289279A0A1B0GTE1 492 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 TMEM212A6NML5 194 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 KRBOX1C9JBD0 128 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 GATCO43716 136 aaKnown RBP8.65□□□□□ -1.02
TPM1-233ENST00000610733 UBBP0CG47 229 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 UBCP0CG48 685 aaKnown RBP8.65□□□□□ -1.02
TPM1-233ENST00000610733 ALOX5APP20292 161 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 RAB3AP20336 220 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 SDHAP31040 664 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 CTHP32929 405 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 CD80P33681 288 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 TSPAN7P41732 249 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 OR2B8PP59922 312 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 MLC1Q15049 377 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 ZNF679Q8IYX0 411 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 OR1S2Q8NGQ3 325 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 OR5H2Q8NGV7 314 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 KLHDC3Q9BQ90 382 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 ABHD6Q9BV23 337 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 ALKBH4Q9NXW9 302 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 PCDHB10Q9UN67 800 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 PRELID3BQ9Y3B1 194 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 COL4A6Q14031 1691 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 CFAP54Q96N23 3096 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 TMED7-TICAM2A0A0A6YYA0 188 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 PRR32B1ATL7 298 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 IGHV3-9P01782 118 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 HLA-DOBP13765 273 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 ZNF16P17020 682 aaPredicted RBP8.65□□□□□ -1.02
TPM1-233ENST00000610733 AGTR1P30556 359 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 OPRM1P35372 400 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 DHRS2Q13268 280 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 C14orf28Q4W4Y0 310 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 LANCL3Q6ZV70 420 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 SEMA6DQ8NFY4 1073 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 OR4K17Q8NGC6 315 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 OR1J4Q8NGS1 313 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 NUBPLQ8TB37 319 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 C15orf40Q8WUR7 153 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 C10orf90Q96M02 699 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 GPR137Q96N19 417 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 NKX6-2Q9C056 277 aaPredicted RBP8.65□□□□□ -1.02
TPM1-233ENST00000610733 POLE3Q9NRF9 147 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 OPN4Q9UHM6 478 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 TMED7Q9Y3B3 224 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 CBY1Q9Y3M2 126 aa8.65□□□□□ -1.02
TPM1-233ENST00000610733 PCDHGA9Q9Y5G4 932 aaKnown RBP8.65□□□□□ -1.02
TPM1-233ENST00000610733 NLRC5Q86WI3 1866 aa8.65□□□□□ -1.03
TPM1-233ENST00000610733 C7orf66A4D0T2 115 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms