RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 NKIRAS2Q9NYR9 191 aa23.26■■□□□ 1.31
SMAD4-213ENST00000591914 ATPIF1Q9UII2 106 aa23.26■■□□□ 1.31
SMAD4-213ENST00000591914 LHFPL6Q9Y693 200 aa23.26■■□□□ 1.31
SMAD4-213ENST00000591914 DHRS12A0PJE2 317 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 RER1O15258 196 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 CRLF1O75462 422 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 ABHD16AO95870 558 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 TACSTD2P09758 323 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 MAGEB1P43366 347 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 CENPAP49450 140 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 HIST1H3AP68431 136 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.25■■□□□ 1.31
SMAD4-213ENST00000591914 MEP1BQ16820 701 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 PCGF3Q3KNV8 242 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 HIST2H3PS2Q5TEC6 136 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 CYB5R2Q6BCY4 276 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 HIST2H3AQ71DI3 136 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 CANT1Q8WVQ1 401 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 DDOQ99489 341 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 CHODLQ9H9P2 273 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 POLR1DQ9Y2S0 133 aa23.25■■□□□ 1.31
SMAD4-213ENST00000591914 A8MV72 311 aaPredicted RBP23.24■■□□□ 1.31
SMAD4-213ENST00000591914 CST1P01037 141 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 TFP02787 698 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 MT-ND5P03915 603 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 HOXB6P17509 224 aaKnown RBP23.24■■□□□ 1.31
SMAD4-213ENST00000591914 GSTM3P21266 225 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 GZMKP49863 264 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 MMP15P51511 669 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 ZNF362Q5T0B9 420 aaPredicted RBP23.24■■□□□ 1.31
SMAD4-213ENST00000591914 OR1F12Q8NHA8 337 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 GTF3AQ92664 365 aaKnown RBP23.24■■□□□ 1.31
SMAD4-213ENST00000591914 FN3KQ9H479 309 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 TBC1D23Q9NUY8 699 aa23.24■■□□□ 1.31
SMAD4-213ENST00000591914 LILRA1O75019 489 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 DNAJC8O75937 253 aaPredicted RBP23.23■■□□□ 1.31
SMAD4-213ENST00000591914 ACHEP22303 614 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 TUBG1P23258 451 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 COL8A2P25067 703 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 COX10Q12887 443 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 FLOT2Q14254 428 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 LNX2Q8N448 690 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 GJC3Q8NFK1 279 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 OR10G2Q8NGC3 310 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 SLC7A6Q92536 515 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 TUBG2Q9NRH3 451 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 JMJD1CQ15652 2540 aa23.23■■□□□ 1.31
SMAD4-213ENST00000591914 CCL8P80075 99 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 TEKQ02763 1124 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 BNIP1Q12981 228 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 CD300LDQ6UXZ3 194 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.22■■□□□ 1.31
SMAD4-213ENST00000591914 YIPF5Q969M3 257 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 TSSK6Q9BXA6 273 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 HDHD2Q9H0R4 259 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 POMPQ9Y244 141 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 GRIP1Q9Y3R0 1128 aa23.22■■□□□ 1.31
SMAD4-213ENST00000591914 ARRDC5A6NEK1 342 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 RP2O75695 350 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 SOX14O95416 240 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 ZNF16P17020 682 aaPredicted RBP23.21■■□□□ 1.31
SMAD4-213ENST00000591914 ZNF81P51508 661 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 CHN2P52757 468 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 SLC36A3Q495N2 470 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 CORO6Q6QEF8 472 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 DCLRE1CQ96SD1 692 aaKnown RBP23.21■■□□□ 1.31
SMAD4-213ENST00000591914 COQ7Q99807 217 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 NIPSNAP1Q9BPW8 284 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 POFUT1Q9H488 388 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 CGGBP1Q9UFW8 167 aaPredicted RBP23.21■■□□□ 1.31
SMAD4-213ENST00000591914 KLHL21Q9UJP4 597 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 BAIAP2Q9UQB8 552 aa23.21■■□□□ 1.31
SMAD4-213ENST00000591914 PLSCR5A0PG75 271 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 LRP5LA4QPB2 252 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 TRIP10Q15642 601 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 SLC18B1Q6NT16 456 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 SPATA24Q86W54 205 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 HIPK1Q86Z02 1210 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 CYB561A3Q8NBI2 242 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 OR2T33Q8NG76 320 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 OR4Q3Q8NH05 313 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 GIPC3Q8TF64 312 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 MSI2Q96DH6 328 aaKnown RBP23.2■■□□□ 1.3
SMAD4-213ENST00000591914 FEVQ99581 238 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 CYSLTR2Q9NS75 346 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 ZNF275Q9NSD4 429 aaPredicted RBP23.2■■□□□ 1.3
SMAD4-213ENST00000591914 CYB5R1Q9UHQ9 305 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 STARD10Q9Y365 291 aa23.2■■□□□ 1.3
SMAD4-213ENST00000591914 ABCA2Q9BZC7 2435 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 TCRBV3S1A0A5B6 114 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 J3QW42 95 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 ADH4P08319 380 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 DBHP09172 617 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 GGT2P36268 569 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 LIPAP38571 399 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 TMEM33P57088 247 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 PSG7Q13046 419 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 FAM209AQ5JX71 171 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 TMEM179BQ7Z7N9 219 aa23.19■■□□□ 1.3
SMAD4-213ENST00000591914 PRIMA1Q86XR5 153 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms