RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 NABP1Q96AH0 204 aa10.65□□□□□ -0.7
CCBE1-203ENST00000589116 RBM24Q9BX46 236 aaKnown RBP10.65□□□□□ -0.7
CCBE1-203ENST00000589116 TPK1Q9H3S4 243 aa10.65□□□□□ -0.7
CCBE1-203ENST00000589116 PLGRKTQ9HBL7 147 aa10.65□□□□□ -0.7
CCBE1-203ENST00000589116 AKIP1Q9NQ31 210 aa10.65□□□□□ -0.7
CCBE1-203ENST00000589116 PLSCR2Q9NRY7 297 aa10.65□□□□□ -0.7
CCBE1-203ENST00000589116 TRBV5-5A0A0J9YX44 114 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 K7ENP7 123 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 SRSF10O75494 262 aaKnown RBP10.64□□□□□ -0.71
CCBE1-203ENST00000589116 NTF4P34130 210 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 KIR3DL2P43630 455 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 MMP16P51512 607 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 ZNF846Q147U1 533 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 SGCAQ16586 387 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 Q499Y3 187 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 FAM27BQ5VT28 67 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 INO80CQ6PI98 192 aaPredicted RBP10.64□□□□□ -0.71
CCBE1-203ENST00000589116 CORO6Q6QEF8 472 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 KLHL24Q6TFL4 600 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 SPATC1Q76KD6 591 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 CATSPERDQ86XM0 798 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 MCEMP1Q8IX19 187 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 PRSS35Q8N3Z0 413 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 ZNF676Q8N7Q3 588 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 GPR148Q8TDV2 347 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 RGP1Q92546 391 aaPredicted RBP10.64□□□□□ -0.71
CCBE1-203ENST00000589116 BORCS5Q969J3 196 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 ZNF775Q96BV0 537 aaPredicted RBP10.64□□□□□ -0.71
CCBE1-203ENST00000589116 SARAFQ96BY9 339 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 OR14A2Q96R54 314 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 SLCO5A1Q9H2Y9 848 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 MOB1AQ9H8S9 216 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 SMURF1Q9HCE7 757 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 ASH2LQ9UBL3 628 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 CAMK2AQ9UQM7 478 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 PIEZO2Q9H5I5 2752 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 CACNA1CQ13936 2221 aa10.64□□□□□ -0.71
CCBE1-203ENST00000589116 SHISA3A0PJX4 238 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 LOC110117498-PIK3R3F6TDL0 507 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 DVL2O14641 736 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 RAF1P04049 648 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 YES1P07947 543 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 CLEC2LP0C7M8 214 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 UCNP55089 124 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 ENDOGQ14249 297 aaKnown RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 C3AR1Q16581 482 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 NRN1LQ496H8 165 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 HSD17B12Q53GQ0 312 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 CFAP77Q6ZQR2 320 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 SIAH3Q8IW03 269 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 GJC3Q8NFK1 279 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 IL17RDQ8NFM7 739 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 OR10S1Q8NGN2 331 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 DERL3Q96Q80 235 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 ALKBH3Q96Q83 286 aaPredicted RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 ZNF416Q9BWM5 594 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 CRLF2Q9HC73 371 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 PALMDQ9NP74 551 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 CENPMQ9NSP4 180 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 TMEM38BQ9NVV0 291 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 PLEKHB1Q9UF11 243 aaPredicted RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 USP9XQ93008 2570 aaPredicted RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 SLC22A20A6NK97 555 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 PNPP00491 289 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 PSMA6P60900 246 aaKnown RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 GRB2P62993 217 aaKnown RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 HIST1H3AP68431 136 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 MFGE8Q08431 387 aaPredicted RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 FAM27D1Q5T7N8 215 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 HIST2H3PS2Q5TEC6 136 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 ZNF704Q6ZNC4 412 aaPredicted RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 HIST2H3AQ71DI3 136 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 ADGRE4PQ86SQ3 457 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 TUSC5Q8IXB3 177 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 MFSD4AQ8N468 514 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 FOXB1Q99853 325 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 KCNS3Q9BQ31 491 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 WACQ9BTA9 647 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 PPIL3Q9H2H8 161 aaKnown RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 GPR35Q9HC97 309 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 PNRC2Q9NPJ4 139 aaKnown RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 GLRX2Q9NS18 164 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 DDX28Q9NUL7 540 aaKnown RBP10.63□□□□□ -0.71
CCBE1-203ENST00000589116 FBXL3Q9UKT7 428 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 B3GNT3Q9Y2A9 372 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 EMC9Q9Y3B6 208 aa10.63□□□□□ -0.71
CCBE1-203ENST00000589116 PHF3Q92576 2039 aaKnown RBP10.62□□□□□ -0.71
CCBE1-203ENST00000589116 A0A1B0GTH9 108 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 TMEM269A0A1B0GVZ9 245 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 OR14I1A6ND48 311 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 RPL36A-HNRNPH2H7BZ11 118 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 TMEM127O75204 238 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 KRT33AO76009 404 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 CRYABP02511 175 aaKnown RBP10.62□□□□□ -0.71
CCBE1-203ENST00000589116 PDGFAP04085 211 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 ISG15P05161 165 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 CST2P09228 141 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 OCM2P0CE71 109 aa10.62□□□□□ -0.71
CCBE1-203ENST00000589116 UBCP0CG48 685 aaKnown RBP10.62□□□□□ -0.71
CCBE1-203ENST00000589116 BMP4P12644 408 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms