RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ZNF181Q2M3W8 571 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 ZNF404Q494X3 552 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 ALG10Q5BKT4 473 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 PAGE3Q5JUK9 113 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 INTS11Q5TA45 600 aaKnown RBP11.15□□□□□ -0.62
COPS3-214ENST00000577246 FOXL2NBQ6ZUU3 175 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 MAVSQ7Z434 540 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 RBM45Q8IUH3 476 aaKnown RBP11.15□□□□□ -0.62
COPS3-214ENST00000577246 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 LIPHQ8WWY8 451 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 GATAD2BQ8WXI9 593 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 PTP4A1Q93096 173 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 CPPED1Q9BRF8 314 aaPredicted RBP11.15□□□□□ -0.62
COPS3-214ENST00000577246 TMEM246Q9BRR3 403 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 TRIM15Q9C019 465 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 TMEM120BA0PK00 339 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 HTR3EA5X5Y0 456 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 A6NIZ1 184 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
COPS3-214ENST00000577246 DOK2O60496 412 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 LIPFP07098 398 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 TSPAN19P0C672 248 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 NPY4RP50391 375 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 WDR4P57081 412 aaKnown RBP11.14□□□□□ -0.63
COPS3-214ENST00000577246 TAS2R41P59536 307 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 RAP1BP61224 184 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 RPL27P61353 136 aaKnown RBP11.14□□□□□ -0.63
COPS3-214ENST00000577246 RAP1AP62834 184 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 TOP3AQ13472 1001 aaPredicted RBP11.14□□□□□ -0.63
COPS3-214ENST00000577246 TNFAIP8L3Q5GJ75 292 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 CD276Q5ZPR3 534 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 WDR93Q6P2C0 686 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 EPGNQ6UW88 154 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 DCDC5Q6ZRR9 648 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 FUNDC1Q8IVP5 155 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 OR5L1Q8NGL2 311 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 MOSPD2Q8NHP6 518 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 PFN4Q8NHR9 129 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 LINC01006Q8NI28 216 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 TMEM239Q8WW34 195 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 MEGF10Q96KG7 1140 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 PRSS27Q9BQR3 290 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 NKIRAS1Q9NYS0 192 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 MED31Q9Y3C7 131 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 USH1CQ9Y6N9 552 aa11.14□□□□□ -0.63
COPS3-214ENST00000577246 C5orf63A6NC05 138 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 SGCEO43556 437 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 ZNF205O95201 554 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 CYB5R3P00387 301 aaPredicted RBP11.13□□□□□ -0.63
COPS3-214ENST00000577246 RGS6P49758 472 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 PROK1P58294 105 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 ENDOGQ14249 297 aaKnown RBP11.13□□□□□ -0.63
COPS3-214ENST00000577246 KCNJ8Q15842 424 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 RUNDC3AQ59EK9 446 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 WDR25Q64LD2 544 aaPredicted RBP11.13□□□□□ -0.63
COPS3-214ENST00000577246 GDPGP1Q6ZNW5 385 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 OR8G5Q8NG78 346 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 OR4D11Q8NGI4 311 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
COPS3-214ENST00000577246 TMEM255BQ8WV15 326 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 LRTOMTQ8WZ04 291 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 RASD2Q96D21 266 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 ZNF582Q96NG8 517 aaPredicted RBP11.13□□□□□ -0.63
COPS3-214ENST00000577246 PCGF1Q9BSM1 259 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 POLE4Q9NR33 117 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 ACOXLQ9NUZ1 547 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 HIF3AQ9Y2N7 669 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 STARD10Q9Y365 291 aa11.13□□□□□ -0.63
COPS3-214ENST00000577246 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 GPR137BO60478 399 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 TOX4O94842 621 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 OR5F1O95221 314 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 TSPAN15O95858 294 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 THRBP10828 461 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 CFHR2P36980 270 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 RBMXP38159 391 aaKnown RBP11.12□□□□□ -0.63
COPS3-214ENST00000577246 SLC18A1P54219 525 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 LAPTM4AQ15012 233 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 REC114Q7Z4M0 266 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 TSPYL5Q86VY4 417 aaPredicted RBP11.12□□□□□ -0.63
COPS3-214ENST00000577246 OR5AS1Q8N127 324 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 PCYOX1LQ8NBM8 494 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 OR10AD1Q8NGE0 317 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 FAM110DQ8TAY7 271 aaPredicted RBP11.12□□□□□ -0.63
COPS3-214ENST00000577246 ERGIC1Q969X5 290 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 DPAGT1Q9H3H5 408 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 POFUT1Q9H488 388 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 RABEP2Q9H5N1 569 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 C20orf141Q9NUB4 165 aa11.12□□□□□ -0.63
COPS3-214ENST00000577246 PIN1P1O15428 100 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 CSF1P09603 554 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 IFNA8P32881 189 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 AQP6Q13520 282 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 AGKQ53H12 422 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 METTL11BQ5VVY1 283 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 RUSC1-AS1Q66K80 236 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms